G109322 (LOC103376870)


Basic Information

Item Value
gene id G109322
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3340118 ~ 3433270 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136854
aaatacttttttccctcactgtagatatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagagcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattcaacctttgtgacatggtgcattattctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccATGGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136854 True 454 lncRNA 0.44 2 3340118 3433270

Neighbor

gene id symbol gene type direction distance location
AMCG00006372 NA coding downstream 3865 3329356 ~ 3336253 (-)
AMCG00006365 NA coding downstream 136231 3178729 ~ 3203887 (-)
AMCG00006362 NA coding downstream 200583 3137907 ~ 3139535 (-)
AMCG00006363 NA coding downstream 215918 3120277 ~ 3124200 (-)
AMCG00006361 NA coding downstream 222443 3112543 ~ 3117675 (-)
AMCG00006376 LOC101471702 coding upstream 6241 3439511 ~ 3452179 (-)
AMCG00006377 LOC103388862,LOC106582320,LOC103356805 coding upstream 42721 3475991 ~ 3479508 (-)
AMCG00006380 NA coding upstream 73041 3506311 ~ 3515208 (-)
AMCG00006381 gtf2h4 coding upstream 82438 3515708 ~ 3524019 (-)
AMCG00006382 NA coding upstream 130959 3564229 ~ 3565417 (-)
G109294 NA non-coding downstream 52889 3286270 ~ 3287229 (-)
G109163 NA non-coding downstream 507789 2818469 ~ 2832329 (-)
G109099 NA non-coding downstream 942128 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 949566 2346522 ~ 2390552 (-)
G109091 LOC103376870 non-coding downstream 983880 2350754 ~ 2356238 (-)
G109432 NA non-coding upstream 115344 3548614 ~ 3561944 (-)
G109439 NA non-coding upstream 153326 3586596 ~ 3655123 (-)
G109472 NA non-coding upstream 372386 3805656 ~ 3807787 (-)
G109483 NA non-coding upstream 393240 3826510 ~ 3834423 (-)
G109514 NA non-coding upstream 433450 3866720 ~ 3867041 (-)
AMCG00006354 NA other downstream 445584 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 753272 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1010127 2324131 ~ 2329991 (-)
G108938 NA other downstream 1209863 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 1315975 2020001 ~ 2024143 (-)
AMCG00006390 NA other upstream 265615 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 296772 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 719546 4152816 ~ 4158123 (-)
G109633 NA other upstream 731664 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 734780 4168050 ~ 4177052 (-)

Expression


Co-expression Network