G109334


Basic Information

Item Value
gene id G109334
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3367197 ~ 3369548 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136866
cacGGGTTTACTGTGTGTAAATGCCAATCCTCTCTATATAATAtagtacacaatttaaaataatatggaaaatacaaatgttaatcGGTCAGTACCCTCAGTTGTCAATGCTGTAGTTGGCAATATCTTGGTGGTTGGATGCTTTGTGAAAGGGGCAGGTTAAGAATGTAAATGTACCACTTGAAGGGATATTAAATGTGGGGACCTTAGTAGCTGTTTCAGAGGTAGAGTCTGCTGTCGTTTCACTGGATTCATTATTCTCAGATCTTTGGGGGTGTAAGTAAATGCACGTGTAACAGTAGTCATGACAGTTGTGGGGTATTTAGTAGATGCACCTGTCTCATTGGTTGGGATGAGGGATGTTGAGGTCTGAGAAAATACTGTTGTCTCACTGGTAGGAATAGTGGATGTTGGGGTCCCAGAAGTTACTGTTGTCTCAGTAGTTGGGATAGTGGATGCTGGGGTCCCAGAAGTAGCTGTTGTCTCAGTGGTTGGGATAATGGATGCTGTGGTCCCAGAGGTTACTGATGTCTGAGTGGTAGGGATAGTGGATGTTGGGGTCTCAGCAGTTACTGTTGTCTGAGTGGTAGGGATAGTGTATGTTGGGGTCTCAGAAGTAATTGTTGTCTCAGTGGTTGGGATAGTGTATGTTGGGGTCTCAGCAGTTACTGTTGTCTGAGTGGTAGGGATAGTGGATGCTGGGGTCCCAGAAGTAACTGTTGTCTCAGTGGTTGGGATAGTGTATGTTGGGGTCTCTGAAGTTACTGATGTCTGAGTGGGAGGGATAGTGGATGCTGGTGTCCCAGAAGTAACTGTTGTCTCAGTGGTTGGGATAGTGGATGCCGGAGTTTCANNNGTTACTGTTGTCTCAGTGTTTGGGATAATGGATGTTGTGGTCCCAGAGGTTACTGATGTCTGAGTGGGAGGGATAGTGGACGCTGGGGTCCCAGAAGTAGCCGTTGTCTCAGTGGTTGGGATAGTGGATGCTGGAGTGGATGCTGGGGTCTCAGAAGATACCATTGTCTCAGTAGTTGGGATAGTGAATTTTGGGGTCTCTGAAGTTACTGTTGTCTCAGTGGTTGGGATAGTGGATGCTGGAGTTTCAGAAGTTACTGTTGGCTGAGTTGTTGGGATGGTGGATTTTGGGGTCCGAGACGTTACTGTTGTCTCAGTGGTTGACATAGTAGATGTTGGTGCCCAAGAAGTTACCGTTGTCTCAGTGGTTGATATAGTGTCCATTGGGCTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136866 True 1249 lncRNA 0.46 2 3367197 3369548

Neighbor

gene id symbol gene type direction distance location
AMCG00006371 NA coding downstream 5360 3356795 ~ 3361837 (-)
AMCG00006372 NA coding downstream 30944 3329356 ~ 3336253 (-)
AMCG00006365 NA coding downstream 163310 3178729 ~ 3203887 (-)
AMCG00006362 NA coding downstream 227662 3137907 ~ 3139535 (-)
AMCG00006363 NA coding downstream 242997 3120277 ~ 3124200 (-)
AMCG00006376 LOC101471702 coding upstream 69963 3439511 ~ 3452179 (-)
AMCG00006377 LOC103388862,LOC106582320,LOC103356805 coding upstream 106443 3475991 ~ 3479508 (-)
AMCG00006380 NA coding upstream 136763 3506311 ~ 3515208 (-)
AMCG00006381 gtf2h4 coding upstream 146160 3515708 ~ 3524019 (-)
AMCG00006382 NA coding upstream 194681 3564229 ~ 3565417 (-)
G109294 NA non-coding downstream 79968 3286270 ~ 3287229 (-)
G109163 NA non-coding downstream 534868 2818469 ~ 2832329 (-)
G109099 NA non-coding downstream 969207 2394749 ~ 2397990 (-)
G109090 NA non-coding downstream 976645 2346522 ~ 2390552 (-)
G109432 NA non-coding upstream 179066 3548614 ~ 3561944 (-)
G109439 NA non-coding upstream 217048 3586596 ~ 3655123 (-)
G109472 NA non-coding upstream 436108 3805656 ~ 3807787 (-)
G109483 NA non-coding upstream 456962 3826510 ~ 3834423 (-)
G109514 NA non-coding upstream 497172 3866720 ~ 3867041 (-)
AMCG00006354 NA other downstream 472663 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 780351 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1037206 2324131 ~ 2329991 (-)
G108938 NA other downstream 1236942 2097818 ~ 2130255 (-)
AMCG00006313 NA other downstream 1343054 2020001 ~ 2024143 (-)
AMCG00006390 NA other upstream 329337 3698885 ~ 3728519 (-)
AMCG00006398 NA other upstream 360494 3730042 ~ 3815517 (-)
AMCG00006414 NA other upstream 783268 4152816 ~ 4158123 (-)
G109633 NA other upstream 795386 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 798502 4168050 ~ 4177052 (-)

Expression


Co-expression Network