G109412


Basic Information

Item Value
gene id G109412
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3729887 ~ 3730840 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU136981
ATCCACATTTACTTTTCTAATGttaccatttaaaattaattaataaaaaaagcctTCTAGAAggtggatttaaaacaaaagtgtgaTGTGAATATGGATATAAATCTAATCTTGTACAGCTgcattaatgtgaaataaatgccACAGACAATAAAACATAGCATAGGAAACTTGTTGAGAAACAACTAACCAGAAtagaacaaagaataaaatgGGGAAACCACAGAAAACGTCCGGTGAGCACAGGCGACAAAGTGGGCACATCGATCACAAAAATCTCAGACCACACCCACTTGACCCCtaaacaaacatgttaaataCAGCAGTCACCTTCTGTAGAGACACATTACAAGACACAGTTTCACAACAGATTGTAgccaataaataacaattaatacaaacgGTGCTGTGATaaagactgcaaaaaaaaaaacctggttCTCCATCTGTGGTGGTTTTCAATCCAGTGGAAGCATGACAGTAATTTTCctcagtttaaaaacaatttatttttgccCTTGACTGCTCTGTGATCTGGTGAAGATACACAGTTCTGTCTGTGGCGTAGGTGTGGCTTGTGTGAATCTGTATGTTGGCGTAATCTGACTCCACCTCTGCCCCTACCTGCACTGCTCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136981 True 639 lncRNA 0.38 2 3729887 3730840

Neighbor

gene id symbol gene type direction distance location
AMCG00006386 NA coding upstream 60956 3653239 ~ 3668931 (+)
AMCG00006384 NA coding upstream 97766 3623947 ~ 3632121 (+)
AMCG00006383 NA coding upstream 133034 3585455 ~ 3596853 (+)
AMCG00006378 NA coding upstream 177533 3541718 ~ 3552354 (+)
AMCG00006374 NA coding upstream 301326 3426425 ~ 3428561 (+)
AMCG00006389 NA coding downstream 18163 3749003 ~ 3763628 (+)
AMCG00006392 NA coding downstream 83773 3814613 ~ 3819824 (+)
AMCG00006396 NA coding downstream 92731 3823571 ~ 3824069 (+)
AMCG00006394 NA coding downstream 94728 3825568 ~ 3826749 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding downstream 101421 3832261 ~ 3839998 (+)
G109405 NA non-coding upstream 15108 3699108 ~ 3714779 (+)
G109389 NA non-coding upstream 180899 3548614 ~ 3548988 (+)
G109301 LOC103376870 non-coding upstream 335956 3340089 ~ 3393931 (+)
G109260 NA non-coding upstream 493486 3234905 ~ 3236401 (+)
G109218 NA non-coding upstream 660659 3016779 ~ 3069228 (+)
G109396 NA non-coding downstream 41709 3772549 ~ 3774544 (+)
G109523 LOC100846954 non-coding downstream 179121 3909961 ~ 3911048 (+)
G109530 NA non-coding downstream 205140 3935980 ~ 3936902 (+)
G109532 NA non-coding downstream 212929 3943769 ~ 3943994 (+)
G109541 NA non-coding downstream 245888 3976728 ~ 4035308 (+)
AMCG00006387 NA other upstream 80976 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 108091 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 117129 3599241 ~ 3612758 (+)
G109362 NA other upstream 223208 3503181 ~ 3506679 (+)
G109309 NA other upstream 364322 3361354 ~ 3365565 (+)
AMCG00006393 ppp1r11,LOC107711309 other downstream 128094 3858934 ~ 3864732 (+)
G109538 NA other downstream 232757 3963597 ~ 3963996 (+)
G109570 NA other downstream 421976 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 428683 4159523 ~ 4167952 (+)
G109714 NA other downstream 746094 4476934 ~ 4477570 (+)

Expression


Co-expression Network