G109483


Basic Information

Item Value
gene id G109483
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3826510 ~ 3834423 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137095
CCTGGTTGAACTCCAGCACGTCCAGCAGGTCGAACAGCTTGCGGTTCTTCTCGTTGTCCTTCAGCTTGACGTAGTACTGCTGCAGGCCGTGCAGGGTCAGCTTCGTCTCGTCGTCCACAAAGATCTCCATTGGCtgcagggaggggagggagggaaaagagagagggcCCAGGGTTAGAAATTCACCCTCCCCTCCCACCCCAGTGTCAACTCATCaactctacctctctctctaacacacactTTCAATCGCACTCGCTGTACAGACACAGCACTGTGGAATCCACAGGGCACACATCGCTgcaggcacacacactcacacaccagcTGTCTGTCAAAGGAACCCCCCCATTCCCTTCCAGGAACCTCGATTCTTGCCCCCCCCGTATCTACAGATACCTTGAAGGGAAGGGTAGAGAATTGTGTATGTGAGGGGGTCAATTTGAGAGAGAGCttatgtacacacaaacacacactcgaACACTGACACTCTGTGTAGCACTGAGCTATGGTTGATGGGGTGAGAGTTTGCtctgattgattgacagttctCGGGCTCTCCTCCAGCTCCACCCCGGGGAATTAACCAACTGGCTGTGTACCGTCAGAGCTGTTGAAGAGCTGCTGAACACAGCAGGGAACTGAGAAGAACAGTCAAAGACAATAGACCATGGTGGGGAAGACCTGAGCCAGGATCCCAATCAAGGCTAGGTTACTCTGCGACTGACACTCACTGAGCAACTGACACACCAACTGACTGATTGAATGATACCCTGATTGCCCAGAACATTGAGtgactgatgcactgactgacTCATTCCCTGACCATGTACCGGCTGAAGGATCTGATTAAAGTGCagaccagtcagtcagtgcgtaTCAGTGGCTATAATGTTCCTCTGCAGCAGCACACGTGTGTTCAGTAACAGTTCGACAGCTCCGCTCACCAGCCCCCTAAACCCCTCCTGCTCTGACTACCAGGAGCTTCTTATTTTGCATTCCCCTGCCACACTGTCTCCTGTGCACAAGGCAACATCTGGCTCCCCTGTCCCCAATGGTGGGCGCCACTGTGCGGTAGGTATCGTTATTTAGCAAGCTTGCTAAACCTGCTTGCTAAATAGGGATCCTAATTCCTTTCGCTACACTGACAGCTGCCCTGGCCAAATACGGAGACTCACTTGACCGCCCTGTTACAGCAGAGGGGGCACTGGCCTGCTAGATAAGGAGCCCTGCAGACTTACCTGGGTGTCTGCGTCAATGAGCAGCACAGGGCTGGTATGACAGCGTCCAGGGCAGAAGCGAGTCAATGCAGTGCCCTCTATCTCCCTGCTAACTCTCATCTACCTGTGTCATTAACACACACCCCTGTATACTGCACAACAGCATCAGTATACTCTATACCAGGTAAACTAGCTCTATATGGCATCAGCACACCCTATACAATGTAAACAAGACCTATTTCATTAACACATCCCATACACTGCACGTAGCAACTCTACAGCAATATTCCAGGCCTTATGCACTATAAACTAGCTCTATAGCATTAGCACACTCCACAGTGTAGATGAGCTCTACAGCAACATACCCTATACACCAGCTCTATACCATTAACACAGGCCATACACTGCATACCAACACTATAGCAGCAACCTATACAGTATAAACTAGCCTTATAGCGTCATAACAATCTGTGAACTGTATATCAGCTCTATAACAATAACACGATCTGCAAACTGTATACCAGCTCTATAGTATTAACATGATTTACAGACTGTATACCAGCTCTATAGCATTAACATGATCTAGACAGTATACCAGATCTACAAACACTAACACAGCCCAAatacaatacagacacactacAGGCCGTGTAGCTGCTCtattgcacaaacacacacctggcAGACTGCATTGCCAGCTCCTCAGTTCAACACCCTCCTGGGTCACTGTATACCAGCCCAGTCTCATTAACACCCTCCCTACCCGGCCCCTGAGGGCGCTCTGTGGACAGTGCAGATCAGCCAGAGTATGGGCAAAGGATAAAGACTGCTCTGGGGCCGGGCAGCAGCCGCCCGCCCTGCCGTCCGTTTCTCTGTGCGTGTCCGTCTGCCTGTCCGTCGTCCAGTCGGTGCCACGGCCCCCCCGACCCCTGCAGCTCTCCATCCTGTCCAGCGCAGGgggctcctctctctctcgctctctggaATCTCGCGGTTCTCCTATATTACTGGGGTCTGGGCCATCTTCGGTGTGTGAGTGGGAGAAGGGCTGTGCGTGTGAAGGACTAGCGTTGTGTGTTGCAGTTCTGTGACTGAGGGAGggggtgtgtgtgagcatgtgtgtttAGCATGTGTGTGGCAGTGCTAATGTGTGAGTATCTCTCAGTGCTGGGGACAAAAATTTGCTTGTAGCAGCCAAAGGTATGTCATATTTTACACTAGCTGCTCTCCCCTTGCCATACAGCTCAAGCCAAAACCCCTCTCACTGTCTTGTGAGCAGAAGTGAATGGTTTCAATATGGGcttctcctcctccccaccGTAAAATCTGTGACCTGTTAGAGTCACGATGTGTGAAATGGTCTTTTAAGCGGTTTCTTTTTCTAAAATCTAATTCTGCTTTCTCTACTTCTGCTTTCCAGTTCTCCTCAAGGAAATTGCCAAGAGCTGATGGGAGGCGCAGGTGAAGTCTTGAGGCGTGGGGGTCTGCCCAGTCTATGCAATACATAAGCCTATGCAATACAGAAGGCAAGGGGGCGTGCCTTCGCAAATTTGGCCTGGTAAGGCGTGAGGCTGTACTTCCAAAGCAGCTGTCGGTAACTGGCTTCCCATTCATTGCTTATTTCGCAAACAGCTGCTGACTGTAGGCAGAGCAGGACTTGTTTATAGCAGCTTTAGTTTCAGCGCTTTCACAGAAGTGCGGTCCCCAGCACTGCTCAGTGCATGTGTCACTAGATGCTGGCTTAAATTAATTACTTAGGTGTCTAGTTATTTCGGGGGGCAGGCGTGTGATATGACCCTGTGATTTTATCTGTGAGAGACATGGAAGGTGGTCTCTGAGAGcaagtgtctgtgttttttcgGTTTTGTTGTACggttttgattttaaagcagGGATGCCATTTCCACACAGCTGGGATTTTGGAAAGGAGAGAGGAATGTGCCGGTGTtgctggggggaggggaggggagagagagggcaggctCGGGATCCCCCCCCCTCCAGACGCATGAGGAGGAAGAACAAAACTGAGAACGAAACTGTTCCCCAGAGAGATGACATGTACACAGAGAGGCATGGAAATCTGCGGGGTTTTCCAAAGGGAGTCACAGTTAACAAAAGCTTTGGGTTGtgaaatttataattttttccctgatcatttgtttttgtttttcgtcAAATTCAACATTGAGCAATAGTTATGCTGCAGGACTTTTTGTTTCTTCCcctattttgtttttggctgAATTCACCAGCTTGAACATTGGGGAATTGTtacagtgacatttttttttttttttttagctagaATTCAGAACTCCACCATAGATGTGATCAAGAGTTTCAGTTGTGCCATAACTTTAATCCATATTTATCTAATAGCTCGTGATAAACACTATACTGTAAGTACTGTGCATTACAAGTGGAGTGTGATTTAATTCTGGGATGTACTGTGCCATATAGCTCAGTAGCTTCCCACTGTAAGAACGCAGGCCTCTTCAAGTCTTAATGAGGTTGCTGGCTCAACTAATTAGTTGCTAAAGGAACCAGACAAGCTTCAGTAGAGGCTTAGAGTAGAAGTGGATATGGgatttttctgttatttctttccgtctttatatattttgtttgacaGTTAAAGGGGATTGTGGGCGTTTCAATAGCTCTCTGAGTAGTGAAGGGGggtaaatggaaaacaaaaaaatgaagggaaaatGTGTGGGAGGAaaagctaaattaaaatgaacaagatggGATGGGAGAGGGAGAAGTGAAGGAAATGGATTGGAGGGGGGGATACGGGCTGAACAAATACGGAATAAAGTCACAATCGAAAAAAACCAACTCCCCTGCCCCgatgtattgattaatttgtgACGCCAGTTCTCTGCCCCCATCCTGTTTTAGGATCCCCATTGTTTTCGATCGATTTCCCTGGTATTGAGTGGTTAGCACACTTGTATTTATGTATCCACTATATGACGTATACACTATTTGCGCTGCCAGTTTTTAATTCCCATTGGCAGAGAGGGATTATCTGTTACGTCTTTCACTCTTGTGAGTTCTCTCTCACGTTTGCAGAAGAAGGGACGGAGAGAGCGACAGCAGTGAAAAGATGAAGTGACAGCAATGGCATGATTGGCAGTCTGGATGGTGATATAGATgactccctccatctctcttctcttctttctctcaTCAGGGTAGCAGTCATAGCAGCCTCTCTCgtttggattattttattaattagtttttttctgctCTCCTCTAAGCCCGCGCACGTCTTTCCTGTCCCCTAACTCTTGTTTGTCATTATCAGCTCATCCCTCCCGATCCAGTCTTCCGCATCTCAACCCTCCCTGTCATCCAGGATTTCTCTCATACCTCACACCCGCGCATGCTGTTCTTTcctttactctctctctcaaccttTTTCTCTGGTCACAGGCTTCTCCAATGCAGACTAATATattgctttctctctccatttgcTCATTGATATCAGGGatctccaattatttatttccattaaaatagcTTCTTTTCGCTCTCTCCCCCGTCTCCACACTGACAAACACTACCCAAGGGCAGCAGCCACCTATATTCGAATATCAAAGCCATTTTAAATTTCACTTCACTTAGTGAATTCCACTTAGATTTTTAGCAGTAGGTCGAGGTGTCAGTATCTTATTTGGAGGTGAAtggaaaactttatttttccacatccacgcatgttttttttccatggaGTGTCCAAAATTGGACACTGTAGCCATTTTACGTTTGTGTCTGACATCGGAGACATATGACTGTGGTGAATTTCAAGGGTGAGTGATTGACGCAACGGGGTGTGAGAACTGGGGCATGGTGCATTGTGGGACTTTGAGTCACAGAAGGTTTTGTGGTGTTACTTGAATTGTGGTGTTTTGAGAGACTGGGATGTCTCtttaggttttaattatttgcagaGAGTGGATTCCTCTGTACTGGACATGAGAATAGGCCAAAGTAGCATTTAAAGGCTTCATGATTTTATATTGGATCGTAACTGAGTGTGCAGTAGATTGAAGAGGAGCTGGGCTGaattaaaagtgtgttttttgttttaactgttgaTCTAGGTCTTTTATACTGTGTGCACCAAAGACAAACGCACACACTTTAAGCAAAAGTCAACTGGGACTGAGTGCCACCTTGACCTGGTCAGGGTTCGGGAGGACCAGACTGGGCCCTGGGGGCTGTAGTTTGGATGGGACTTCTCTTCCCTGCGAGTAGGAATTATTCCTATGTTCACAGCAAAGTCTAAAGTGTACTAAAACATCTCCAAGATTCAACAAGAGCTGTGCTGTAGAAACCACTTAATCCAGGGTTTGAATATGAACAAGACTGGGCTCTCATTTGCATCTCACTGTATCTAATGCCTGTGAGAAAAGTGGTGGGGGGAGGGCGCAGAACAGACAGTGTGCCGGTGCCTATAAGGAACAGACCGGATGTGAAGACTGGGCTCCAAGCGGCAAAACACCAGGGCTCTGACTGCACTGCTCTGTGTTAGCTGGTGTGTTTCCAGAATATATTGTTTTGGATGCAGAGAAGTATATTTAAGTTTTATGGTTAAACAACATCTGCTTTCCCCATTTAGTGAAGTGTGCAAAGCTttgggtttttaatttaattaatttataactaAAAGTtctatactaaataaatatcattattattagtcttaTTTCCAGTTACAAGGGCCCTTACATGGTGGGGAGCTTGGCTCCACAGAGGGTTCTTTCCAATGTTGTTTTAAACGTCCAGTAGAAGTAATTTAGCTGGTCTGGATTGTCAAATACAGACTATGTAACTGTTTTAATACAGAGACACTATAAAGCAGAGCAGCTTGTATAGGCATCtaatcaaaattattttagtAGTAATGAGTAATTTTAACTGTATACAGCCCAGTGTTACCAATACTAGTCTACCAGTGTTGATGCCAAGTCCGTATACAGCCAGTGGTGCGTTTGCCTTATTTTTATGCACTCTGCTCAGACGGAGCAGTGTCCGGACACTGTGCAGTTGGGCGTATTATTGTATGGGCCTGGATACGTCTTAGACTAGTCCCTGTTGGCATCATACAGAATTCTGTGTTAACGCACCAGCTAGATGAGGGCCTACAATACAAGGCATTATTTGAAACTGTAGAGCACAGTCACAGTGCCAGGATATCAAAGTTACTGGTATCTCTCATTTTATCAGTCTCTATTGGCATAGTAGAGCCTTGGATAACTAATTGGGGTCAATTCAGCAGTCTCTAACAAAGCCCCGCTGTTCAAAAGACTGTTCCACACTGATGCTTCCACAGCCCACCCACGCCAGGATCTCTGCCCGTTCCTCTGGCGCAGTCAATATCGTCACCGTATGGCCCAGCGTACTGACACAGCTCCCCGACAGCTCTCCATTTTGCCAATGCTCAGCCTGGTATTGTCAGGCAGTCCGTTTCAGTTTAAAAGCCCCCTCAGTCTGGTCAGTACCGACACTGACAAGGCGCACTGCGCTGGCAGAGTGTGCGACAGCGGTCAGTACTGCCAGTATATTGCCTGCCAACTGACTACAGGCATGCGAATGCTAGGCCCAGTCTTGTGTCAGTTCCAGCTGACTCAAGAACGTCATTGGACTGCTTCTTGTTTAGAATCTGAACGTCTTGGTGTACCACTCAGTATTGACTCTGTAAAATCCTGTTTTGGTTTACTGTTCAGTATCGACTATGTAAAGCCCTGTGTCTTGGTGTAACGGTCAGTTTCTACTCTGTAAAGCCCTGTGTCTTGGTGTACCAGTCAGTATCGACTCTGTAGCAACCCTATACAGCCCCATGTGTCTATGTCTGTAGCATGGATTCAGTCAGCATAGCACCCCTATATATGCTGCTGCCGAAATGCTTTGTGTTAAGGGGGTCAGAATCGACCCCATGTACAGGCTGGGCAGTGCAGTACCCAGAATCCTCAGGGCTGCAGCTGTGGCTTGTCAGGGAGGAAGGGCGAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137095 True 7252 lncRNA 0.47 2 3826510 3834423

Neighbor

gene id symbol gene type direction distance location
AMCG00006399 NA coding downstream 2537 3822915 ~ 3823973 (-)
AMCG00006401 NA coding downstream 48006 3776066 ~ 3778504 (-)
AMCG00006391 NA coding downstream 84229 3735291 ~ 3742281 (-)
AMCG00006388 NA coding downstream 148093 3674830 ~ 3678417 (-)
AMCG00006382 NA coding downstream 261093 3564229 ~ 3565417 (-)
AMCG00006397 NA coding upstream 4625 3839048 ~ 3847723 (-)
AMCG00006400 NA coding upstream 13941 3848364 ~ 3858917 (-)
AMCG00006402 NA coding upstream 39527 3873950 ~ 3878042 (-)
AMCG00006407 NA coding upstream 206071 4040494 ~ 4043227 (-)
AMCG00006406 NA coding upstream 215803 4050226 ~ 4056245 (-)
G109472 NA non-coding downstream 18723 3805656 ~ 3807787 (-)
G109439 NA non-coding downstream 171387 3586596 ~ 3655123 (-)
G109432 NA non-coding downstream 264566 3548614 ~ 3561944 (-)
G109322 LOC103376870 non-coding downstream 393240 3340118 ~ 3433270 (-)
G109334 NA non-coding downstream 456962 3367197 ~ 3369548 (-)
G109514 NA non-coding upstream 32297 3866720 ~ 3867041 (-)
G109540 NA non-coding upstream 141780 3976203 ~ 3976617 (-)
G109609 NA non-coding upstream 142286 3976709 ~ 4035331 (-)
G109619 NA non-coding upstream 247384 4081807 ~ 4083452 (-)
G109628 NA non-coding upstream 304611 4139034 ~ 4139269 (-)
AMCG00006398 NA other downstream 10993 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 97991 3698885 ~ 3728519 (-)
AMCG00006354 NA other downstream 931976 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 1239664 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1496519 2324131 ~ 2329991 (-)
AMCG00006414 NA other upstream 318393 4152816 ~ 4158123 (-)
G109633 NA other upstream 330511 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 333627 4168050 ~ 4177052 (-)
AMCG00006429 NA other upstream 435993 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1743047 5577470 ~ 5603733 (-)

Expression


Co-expression Network