G109532


Basic Information

Item Value
gene id G109532
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3943769 ~ 3943994 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137149
CCACCGAACAGAGACTCTCTGGGGTCTCAAGGTGCCGGTAACTGgacttcagaaataaaagtgCTAACATCCAGATTTTCATTCTGCATTGCCAACCAATCGTGTTCCCACATCACTTTGACATCAAACCCGTGTAATTTTAAGAATTCGGTTTTATACATTGTCTTTTGATATAACCAaccaaatgttgtgtgtgtgacgcTGTTAATGTCATTTTCACTATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137149 True 226 lncRNA 0.40 1 3943769 3943994

Neighbor

gene id symbol gene type direction distance location
AMCG00006408 NA coding upstream 19249 3922421 ~ 3924520 (+)
AMCG00006409 NA coding upstream 21841 3921234 ~ 3921928 (+)
AMCG00006410 NA coding upstream 22987 3919904 ~ 3920782 (+)
AMCG00006404 NA coding upstream 47311 3893263 ~ 3896458 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding upstream 103771 3832261 ~ 3839998 (+)
AMCG00006403 NA coding downstream 135632 4079626 ~ 4082166 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding downstream 147694 4091688 ~ 4099718 (+)
AMCG00006420 NA coding downstream 189874 4133868 ~ 4134566 (+)
AMCG00006412 NA coding downstream 203710 4147704 ~ 4151691 (+)
AMCG00006423 NA coding downstream 235056 4179050 ~ 4185310 (+)
G109530 NA non-coding upstream 6867 3935980 ~ 3936902 (+)
G109523 LOC100846954 non-coding upstream 32721 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 169225 3772549 ~ 3774544 (+)
G109392 NA non-coding upstream 188728 3722519 ~ 3755041 (+)
G109412 NA non-coding upstream 212929 3729887 ~ 3730840 (+)
G109541 NA non-coding downstream 32734 3976728 ~ 4035308 (+)
G109571 NA non-coding downstream 211970 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 212448 4156442 ~ 4156969 (+)
G109573 NA non-coding downstream 213742 4157736 ~ 4159191 (+)
G109575 NA non-coding downstream 224090 4168084 ~ 4169106 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 79037 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 294858 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 321973 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 331011 3599241 ~ 3612758 (+)
G109362 NA other upstream 437090 3503181 ~ 3506679 (+)
G109538 NA other downstream 19603 3963597 ~ 3963996 (+)
G109570 NA other downstream 208822 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 215529 4159523 ~ 4167952 (+)
G109714 NA other downstream 532940 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 580812 4524806 ~ 4527738 (+)

Expression


Co-expression Network