G109538


Basic Information

Item Value
gene id G109538
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 3963597 ~ 3963996 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137156
CGACATGCCTGAACCCCAAGCTCTGCAAGAGGCTTTAATGCTTCATCAGAGTGCCGGCTTAAACTCTCAACAGATGGTGGCCTTTTCAGACATTAGCAAGTTTGAGGAgttgttgtctttaaaaattgtaGTGTGGTACCGTTGTGAGGTAAAGGAAGTATTTGTGAAATTTcagacacatcctgaaacccatACACAgactctgtttctcttcctaagtgatagtcattactttggaataaagagtttgacggcttttttgggttgtttgtACGTTTGTCCTTGGTGTTATAAGGCCTTCAATGATAAGCTTAAGCACCGCTGTGACGGTTACTGTAACGTCTGTTTCAATCCGCAATGTCGTAAGGGTTTGGCACCCACCATCCGCTGTAAAGATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137156 True 400 TUCP 0.43 1 3963597 3963996

Neighbor

gene id symbol gene type direction distance location
AMCG00006408 NA coding upstream 39077 3922421 ~ 3924520 (+)
AMCG00006409 NA coding upstream 41669 3921234 ~ 3921928 (+)
AMCG00006410 NA coding upstream 42815 3919904 ~ 3920782 (+)
AMCG00006404 NA coding upstream 67139 3893263 ~ 3896458 (+)
AMCG00006395 ddx39b,uap56,LOC105012335,LOC104931065,LOC103042292 coding upstream 123599 3832261 ~ 3839998 (+)
AMCG00006403 NA coding downstream 115630 4079626 ~ 4082166 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding downstream 127692 4091688 ~ 4099718 (+)
AMCG00006420 NA coding downstream 169872 4133868 ~ 4134566 (+)
AMCG00006412 NA coding downstream 183708 4147704 ~ 4151691 (+)
AMCG00006423 NA coding downstream 215054 4179050 ~ 4185310 (+)
G109532 NA non-coding upstream 19603 3943769 ~ 3943994 (+)
G109530 NA non-coding upstream 26695 3935980 ~ 3936902 (+)
G109523 LOC100846954 non-coding upstream 52549 3909961 ~ 3911048 (+)
G109396 NA non-coding upstream 189053 3772549 ~ 3774544 (+)
G109392 NA non-coding upstream 208556 3722519 ~ 3755041 (+)
G109541 NA non-coding downstream 12732 3976728 ~ 4035308 (+)
G109571 NA non-coding downstream 191968 4155964 ~ 4156206 (+)
G109572 NA non-coding downstream 192446 4156442 ~ 4156969 (+)
G109573 NA non-coding downstream 193740 4157736 ~ 4159191 (+)
G109575 NA non-coding downstream 204088 4168084 ~ 4169106 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 98865 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 314686 3637743 ~ 3648911 (+)
AMCG00006379 NA other upstream 341801 3570039 ~ 3621796 (+)
AMCG00006385 NA other upstream 350839 3599241 ~ 3612758 (+)
G109362 NA other upstream 456918 3503181 ~ 3506679 (+)
G109570 NA other downstream 188820 4152816 ~ 4155749 (+)
AMCG00006413 NA other downstream 195527 4159523 ~ 4167952 (+)
G109714 NA other downstream 512938 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 560810 4524806 ~ 4527738 (+)
G109781 NA other downstream 1060899 5024895 ~ 5025906 (+)

Expression


Co-expression Network