G109597


Basic Information

Item Value
gene id G109597
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4230234 ~ 4230484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137227
aagcaaagtaaaaaccacagggaaaaaataagagagagaACATTCTCTACTGGGAGATAAATCCAGGTCTGATCCTTCCTGAATTTGACATTTTCGGAGATCACTGGTGTAAAATAATGGCCTCCCACTCTCCCAGACACCAACAACCGTGTTCCCTTTTAAACGCACAACCTCCCATTATTGCTTCTTCTCTACCATCAGATTTAGCAGTCCCAATTGACAATCCACTCTGCACTTCTTCAGGAGGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137227 True 251 lncRNA 0.43 1 4230234 4230484

Neighbor

gene id symbol gene type direction distance location
AMCG00006424 ino80e coding upstream 40148 4187593 ~ 4190086 (+)
AMCG00006423 NA coding upstream 44924 4179050 ~ 4185310 (+)
AMCG00006412 NA coding upstream 78543 4147704 ~ 4151691 (+)
AMCG00006420 NA coding upstream 95668 4133868 ~ 4134566 (+)
AMCG00006411 LOC108414231,LOC106024139,LOC101061046,LOC101068669,LOC105419728,LOC105419724,LOC105419151,LOC105416979,LOC107747774,LOC105419136 coding upstream 130516 4091688 ~ 4099718 (+)
AMCG00006432 NA coding downstream 23850 4254334 ~ 4266243 (+)
AMCG00006433 NA coding downstream 121168 4351652 ~ 4360196 (+)
AMCG00006438 NA coding downstream 211477 4441961 ~ 4450469 (+)
AMCG00006446 NA coding downstream 258013 4488497 ~ 4496374 (+)
AMCG00006444 NA coding downstream 265922 4496406 ~ 4516083 (+)
G109575 NA non-coding upstream 61128 4168084 ~ 4169106 (+)
G109573 NA non-coding upstream 71043 4157736 ~ 4159191 (+)
G109572 NA non-coding upstream 73265 4156442 ~ 4156969 (+)
G109571 NA non-coding upstream 74028 4155964 ~ 4156206 (+)
G109541 NA non-coding upstream 194926 3976728 ~ 4035308 (+)
G109656 NA non-coding downstream 84147 4314631 ~ 4316465 (+)
G109660 NA non-coding downstream 98385 4328869 ~ 4329278 (+)
G109662 tubb,LOC108432309 non-coding downstream 103839 4334323 ~ 4335450 (+)
G109655 NA non-coding downstream 143664 4374148 ~ 4377377 (+)
G109713 NA non-coding downstream 237907 4468391 ~ 4473008 (+)
AMCG00006413 NA other upstream 62282 4159523 ~ 4167952 (+)
G109570 NA other upstream 74485 4152816 ~ 4155749 (+)
G109538 NA other upstream 266238 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 365502 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 581323 3637743 ~ 3648911 (+)
G109714 NA other downstream 246450 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 294322 4524806 ~ 4527738 (+)
G109781 NA other downstream 794411 5024895 ~ 5025906 (+)
G109795 wasl,wasla,LOC105018628 other downstream 850397 5080881 ~ 5098698 (+)
AMCG00006460 wasl,wasla,LOC107698525 other downstream 863787 5094271 ~ 5107022 (+)

Expression


Co-expression Network