G109619


Basic Information

Item Value
gene id G109619
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4081807 ~ 4083452 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137260
taatatattaaaatgattttattcaCACCAATCCTAAACTTTATATCCATATACATGaggtattaaatataaaaatatataaacatttatttcatgaaAGGCTACATTATCATAACAAAGTGATGCAGCTTACACAGCTGCATAATATAATGAGTGTTGGCTAGACTTTCAGTCTTTTAATcggaaattaaatcaatataatagtgatataataatatgaataatactcAATACAATGTAAAccttattaaaaatgttgtttgttttttaacaggtACAATAAGAAAAATCCTCTATCGATAACCGTTCTTACAAATGGAAAGTAATAttgtttcaaagaaaatactcagtgtttatgttttttatgtattcttgATGAAGATAAAAGTGaaactttatataaattatCAAAGAACTCTAGACAAAGGACTCCGGTGTAAATCAAGTCTTAGTGCTGCaggattcatttaattttaattccattatattttttatttagtatagagCCCTTCTGAACAAATTatcaagaaacacaaacattcaaatatagaTACAAACATTAGTAATAGTagaaatctaataataataataataataataataataataatgctaaaaCAGAACAggataataatgaaaaatgtttggcAGAAaggcaataaaaacacagattccTCCAGCATGACAGACCGTTCCAGGGGAAATACaagggggtccacggcttaaggcCTTGGTCTAGTGGTCGTCTTCCCTCCAAGTAATAtaactgaaatacataattgaCGTATTCAAGGTTAATGTATACCTTCTTTAAGGCTTTAAATATACAGTCAACCAGTTCCCCATTCCCCACCGGACCTTCATGAAGCAATTTCTTTCATATGCACTTTTAATTTCTCCCACACCCTCCctgcccttctctctcttcctccccctttcagtcatccctccctctctctgaatCCATTCATCCCCCCTCCCCTATACATTGCATCTCATAGTGACCCTCTGTACCTGTGAGGACATTTTGCACCACGGGGGGGGGCAGTCAACTCTACTTCAGCCCAACCCTTGAGAAAGGTTTCCCCTCACCATGGCCACGTCTCACACACCCTCCCACTGCCTCTCGCTCGCACTGGCCAAGGCACGAGCAAATGAGCGGCACAGCTGCCCAACGTTAAAAAGCAAGAGGAGCAGCGTCCCGTTGTGGGGCTTAAGTACAGGACCCCGCCTCTGAAATATCCCAGTCATGTTTCatccccttctcctcctccttctctacTCTCTTCTCTTCATCGTTGGTTGTTTCACTTTCCTGGGCGTCCGTTGCTGTGGAGGACAGAGACAACCGTTCTGCGGAGATCTGCAGATCAGCCGTCTTCCCATCTTCCTGCTGACAGTTTCCTGCGTCCCCTTGGGCACTTCCTAGGTTGAGATCACTTTCCCCAATTGGCTGCtcttcatttcctttttcttgcAGGGAACTTCCTGTTGCTGGTAGATCGCTTCCTGTTTGCTGTGCTTCGCATCCCATTTCTGGCTGGTTAGTTCCAGTTTCTTGGGCGACACCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137260 True 1573 lncRNA 0.40 2 4081807 4083452

Neighbor

gene id symbol gene type direction distance location
AMCG00006405 NA coding downstream 15664 4058758 ~ 4066143 (-)
AMCG00006406 NA coding downstream 25562 4050226 ~ 4056245 (-)
AMCG00006407 NA coding downstream 38580 4040494 ~ 4043227 (-)
AMCG00006402 NA coding downstream 203765 3873950 ~ 3878042 (-)
AMCG00006400 NA coding downstream 222890 3848364 ~ 3858917 (-)
AMCG00006419 NA coding upstream 5848 4089300 ~ 4090132 (-)
AMCG00006416 LOC104947235,LOC104953484 coding upstream 15995 4099447 ~ 4108705 (-)
AMCG00006417 vars2,vars,LOC107379499 coding upstream 26523 4109975 ~ 4123637 (-)
AMCG00006418 NA coding upstream 42360 4125812 ~ 4130857 (-)
AMCG00006422 NA coding upstream 48516 4131968 ~ 4132747 (-)
G109609 NA non-coding downstream 46476 3976709 ~ 4035331 (-)
G109540 NA non-coding downstream 105190 3976203 ~ 3976617 (-)
G109514 NA non-coding downstream 214766 3866720 ~ 3867041 (-)
G109483 NA non-coding downstream 247384 3826510 ~ 3834423 (-)
G109472 NA non-coding downstream 274020 3805656 ~ 3807787 (-)
G109628 NA non-coding upstream 55582 4139034 ~ 4139269 (-)
G109632 NA non-coding upstream 80530 4163982 ~ 4164557 (-)
G109634 NA non-coding upstream 82876 4166328 ~ 4166589 (-)
G109635 NA non-coding upstream 83499 4166951 ~ 4167239 (-)
G109616 NA non-coding upstream 183375 4266827 ~ 4268470 (-)
AMCG00006398 NA other downstream 266290 3730042 ~ 3815517 (-)
AMCG00006390 NA other downstream 353288 3698885 ~ 3728519 (-)
AMCG00006354 NA other downstream 1187273 2888486 ~ 2894534 (-)
AMCG00006344 NA other downstream 1494961 2581337 ~ 2586846 (-)
AMCG00006328 NA other downstream 1751816 2324131 ~ 2329991 (-)
AMCG00006414 NA other upstream 69364 4152816 ~ 4158123 (-)
G109633 NA other upstream 81482 4164934 ~ 4165600 (-)
AMCG00006415 NA other upstream 84598 4168050 ~ 4177052 (-)
AMCG00006429 NA other upstream 186964 4270416 ~ 4277155 (-)
AMCG00006476 NA other upstream 1494018 5577470 ~ 5603733 (-)

Expression


Co-expression Network