G109655


Basic Information

Item Value
gene id G109655
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4374148 ~ 4377377 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137306
CCTGTGTATTCGAAAATgttactttattaaaatatctacaaaaaaaacgaaacaagaTAAACAACATGAGAACAAAGGAACTCCAGCTTCTGACAGATCAGGACAAAGAAGAGGGGAACAAGGGAGGAGACACAAGTAATGAAATCCCAGAAAAAAAAGACGGGAAACGAAACAAAAAGCGACAATTCCATATATTAGTGTAAAAATCTGTCCCTTGCAATATGTACACATCATTagttcaggaaaataaaaaacaaaaacgacgTTTAAGCAGGAGCACGTACAGTGTATCAAAAGAGACCAGACGAACAGCAGTACAGACGACAACACATCGCCCCTGTAGACCACTCTCTCATCTTGGCACTAATATTTACTCTCGTTtgatagaaaaaacaaatacaacacatcgagttcttttgtgtgtgtgtgcgtgtgcgtgtgctgcACCACTAAGCTATCAATCTGTACACAAGAAATCCTAGCTTACACCCAGCAGAAATCTCCAGTCTTCAATAAAAGGCAGAGAAAAAGCACACTTGTACTGTATTGGTTCCAGTCACAAACAGACATGACATTCAAAGTACAAACCCTGCAACACAACCACTCTGCGCTCCGGTTTCAGCTAATACAGTCACTACAGCCAAAAACCCATCAATCCATCAATAAGAACATAGCAGTAGATATACTGGGGTTTGACTGGCAAGATTTGCAAAGGAAAGCTTGTTTAATTAGTCTGTCTttggacagctgatgaaattgAGTGTGGACCCGCAACGCAACGTAACAACAACCGCTACACAAGTCCGGCTGCACACGGGGGCGTCCGTTTCAAGATTAACTAAACGTGTAAATGTCCGGACCCAGACTGATAGTTTTCTGAGCAACAGCGATTGATTAATAAGAGATGTAGACCGAATGATCGTGATAgctcttttcacttttttctattctttaaaCTCGTAGCCATCAACGCTCTCCCACACACTTCCTGCTCCTTATCTCCCACCGTGAGATCGAGGGCACTGGCTGGTCTCAGCAGCGTAGTTTAAACCGCTCTGAATAATGCAGCCGATTTCCCCAGCATGGGGTGTGATCCATCCTTCGCACATAGAGCGAAAAGATCAACAACGAtgaaaacaaacgaacaaacaacACATTGCGTTAAAAAAAGGCTTAGCTTATTaatgattgttatttttcttttctgatcaGCAGTAAGTAGTAAGTGAAGTCACGGATGGATCAGCGAGCTGTATCCCAGATGAGAAGGGGTGTGGATACTGATGTGGACCGAGCcacgttgtgtgtgtgtgtgtgtgtgtgagtgagtgtgtgtacagtCCAGTGGATTGCGACTCGCTATGCAGAGTCGAATGGGGCTCTAGAACTCTAGTTCCACCTCTCTGTGACACTGCCAGGGCCGGGCCACCACTGAGGCACTGTGACTGATCACAATCGGCACTTCTGCTTTCTCAATTCCTGTTATTCGATGGCCGGCACATCGCACTAAGCTGCGGTTAAGACCGGCTGCTTCCTACTGGCGACACGATCTTGTGACAGTCAATGCCACCACCCGACACCCGGTCACTTCCAACGAAGCGCCTCTGCTTGGGCCCACACCACTACGGATAACCCATTGCACAAGATGTATGGATTCTCTAGAAGGCGGCTTCCATAGACGGGCTTTATTTAGACATTTCTCAGAGCTCCTTCCAATGACATAATTTCTCTCCAGCAGTCAAGCTCAGTTTTGATTTGAAGCTGTAGAGTACGCAGTATCAGCATCATTAGCAAACGATTCAGATTCACAGGAATCAGAGGGGGCTGTTACAAACCCACTTATTTCTCCATCGTTAACAGGCCCGAAACATGTCTCTCAATAGACTATCTGATACAGAACGGCAGTATTGCTCTTTCCTGGCTGTTAAACATGTTGTTTGTAGGggccttgttttatttatagctTGAAACGTCTCCTGGCCTCTAACGGTGGTTCACCGCTCGTTCGGTTGACAGTGTGTTTACTCTTGCTGTGTTCCCGGGAAGATTTTTGCTTAAAGGAAAGTAAACAAATGCCTGACTGACTTGACCGATTCTCTGTGCTCTGAATAGATTGGCCTTTTCCTGCTCGGTGCCCTAGAAATGGCAAGCCTGGTTATCTCAATCTGGGCTGATGAAacggaaaaagaaaaaaaatccccaaaaggTCAAAGCAAAATCCCTTCACCAGCAGCCCACGGCGCGCCCCTCTGCCCAGCCCTCTACCAGCACAGCGTTAAAGTGACTCCTGGGGAGGGATTCTGAGGAGGGGgtcaacttaaaaaaacaaacaaaagaatctAAACCGAGCCAGCGGTCACTGGACCCCCCcgaccccccctccccaacaacaacaaaaaataataatgaaaatgaaaatataaaagaacCCCCCCCTCGATACACATTTTGTCCTTCGATaaccctcccacccccccgACACGTTCACCAAGTCTGTTCCCAGTCACAGCTTGGGGGCATATCTGATAATGGCAGAGAAACCAaattcctccctccctccctctctctctcgccactTAAGTGTCTTTGCTCCTCACCTCATTTGCCTTTGTGAAAACAATCACTTAGGTTTACATATAGTTGTTTTTTGGTGGCACGAAACTGGTTCTGTTTGATCTGACACATTAGATGCATCTGCTCATCGGTGCGtgatactacactacactatttAAACGGCGTTAAACAGCACTGAGACTCCTCCCACAAGACACCAGGCCTCTCGACGAACAGCCTGTCCGTCTGAGCCCGGGGTATCGGGAGCAAGAGAGCGAGGGAGACGGGTTTGGGAGATCGTGTGgcagttcagtgtgtgtgtttcagtgaaaatgtgggtgggggggggggggggggggggggggagcggTCATCTAATTACACTGGCAGTTtaccccaccccaccacccccgCTCTCTCTACACCATGTTCATGGCGTCCTCCAGCAGGAAGCGGTGGATGTTGGGGAAGGAGGGCCGCTCCTTGAAGTCTCGCCCCCAGCAGCTCAGCATCAGCTCGTACAGACCCTGGGGGCACACGTCGGGCCGGGACAGGTACAcctgagagggagggggagagagagagagagagagagagagagagagagagagagagagaggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137306 True 3176 lncRNA 0.48 2 4374148 4377377

Neighbor

gene id symbol gene type direction distance location
AMCG00006433 NA coding upstream 13952 4351652 ~ 4360196 (+)
AMCG00006432 NA coding upstream 107905 4254334 ~ 4266243 (+)
AMCG00006424 ino80e coding upstream 184062 4187593 ~ 4190086 (+)
AMCG00006423 NA coding upstream 188838 4179050 ~ 4185310 (+)
AMCG00006412 NA coding upstream 222457 4147704 ~ 4151691 (+)
AMCG00006438 NA coding downstream 64584 4441961 ~ 4450469 (+)
AMCG00006446 NA coding downstream 111120 4488497 ~ 4496374 (+)
AMCG00006444 NA coding downstream 119029 4496406 ~ 4516083 (+)
AMCG00006442 NA coding downstream 164735 4542112 ~ 4562075 (+)
AMCG00006443 grm8,grm8a,LOC108412277 coding downstream 193147 4570524 ~ 4571515 (+)
G109662 tubb,LOC108432309 non-coding upstream 38698 4334323 ~ 4335450 (+)
G109660 NA non-coding upstream 44870 4328869 ~ 4329278 (+)
G109656 NA non-coding upstream 57683 4314631 ~ 4316465 (+)
G109597 NA non-coding upstream 143664 4230234 ~ 4230484 (+)
G109575 NA non-coding upstream 205042 4168084 ~ 4169106 (+)
G109713 NA non-coding downstream 91014 4468391 ~ 4473008 (+)
G109721 NA non-coding downstream 141540 4518917 ~ 4521249 (+)
G109767 NA non-coding downstream 545755 4923132 ~ 4924794 (+)
G109779 NA non-coding downstream 640712 5018089 ~ 5020403 (+)
G109780 NA non-coding downstream 643919 5021296 ~ 5022178 (+)
AMCG00006413 NA other upstream 206196 4159523 ~ 4167952 (+)
G109570 NA other upstream 218399 4152816 ~ 4155749 (+)
G109538 NA other upstream 410152 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 509416 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 725237 3637743 ~ 3648911 (+)
G109714 NA other downstream 99557 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 147429 4524806 ~ 4527738 (+)
G109781 NA other downstream 647518 5024895 ~ 5025906 (+)
G109795 wasl,wasla,LOC105018628 other downstream 703504 5080881 ~ 5098698 (+)
AMCG00006460 wasl,wasla,LOC107698525 other downstream 716894 5094271 ~ 5107022 (+)

Expression


Co-expression Network