G109660


Basic Information

Item Value
gene id G109660
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4328869 ~ 4329278 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137312
CACATTCCCCTTCCCgtctttcccctcctcctcctcctcatccgaTTCGGGGACCAGAGAAAGCACAGGGCCCGGGGTCTTCTCCAGAGCCAAGGGCCGGACTTGGCGCCGGGGCTGGGATCGGACCCGGGGGGCGGAGCCGGGGGGCAGCGTCGGGGGCTCGCTCTTCTTCAGGAGGGTGTACTGGCAGGGCAGGTCGGCGAACACCAGGAGGTCTCCCTGGGACAGACTGTAGCGGACCTGGGGGGTGAGCTGGGCACGGCCGCGGCGCGTGCCATTCAGGCTGCCGCAATCCCACAGCAGGTGCTCCCCCTGGTGGACCTGGAGGACCGCGTGGCGCTTGGAGATGGAGCTGGCGGGGAGCGTCACCGCGCAGCCGGGCTCTCGTCCAATCACATTCTCCCCGGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137312 True 410 lncRNA 0.70 1 4328869 4329278

Neighbor

gene id symbol gene type direction distance location
AMCG00006432 NA coding upstream 62626 4254334 ~ 4266243 (+)
AMCG00006424 ino80e coding upstream 138783 4187593 ~ 4190086 (+)
AMCG00006423 NA coding upstream 143559 4179050 ~ 4185310 (+)
AMCG00006412 NA coding upstream 177178 4147704 ~ 4151691 (+)
AMCG00006420 NA coding upstream 194303 4133868 ~ 4134566 (+)
AMCG00006433 NA coding downstream 22374 4351652 ~ 4360196 (+)
AMCG00006438 NA coding downstream 112683 4441961 ~ 4450469 (+)
AMCG00006446 NA coding downstream 159219 4488497 ~ 4496374 (+)
AMCG00006444 NA coding downstream 167128 4496406 ~ 4516083 (+)
AMCG00006442 NA coding downstream 212834 4542112 ~ 4562075 (+)
G109656 NA non-coding upstream 12404 4314631 ~ 4316465 (+)
G109597 NA non-coding upstream 98385 4230234 ~ 4230484 (+)
G109575 NA non-coding upstream 159763 4168084 ~ 4169106 (+)
G109573 NA non-coding upstream 169678 4157736 ~ 4159191 (+)
G109572 NA non-coding upstream 171900 4156442 ~ 4156969 (+)
G109662 tubb,LOC108432309 non-coding downstream 5045 4334323 ~ 4335450 (+)
G109655 NA non-coding downstream 44870 4374148 ~ 4377377 (+)
G109713 NA non-coding downstream 139113 4468391 ~ 4473008 (+)
G109721 NA non-coding downstream 189639 4518917 ~ 4521249 (+)
G109767 NA non-coding downstream 593854 4923132 ~ 4924794 (+)
AMCG00006413 NA other upstream 160917 4159523 ~ 4167952 (+)
G109570 NA other upstream 173120 4152816 ~ 4155749 (+)
G109538 NA other upstream 364873 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 464137 3858934 ~ 3864732 (+)
AMCG00006387 NA other upstream 679958 3637743 ~ 3648911 (+)
G109714 NA other downstream 147656 4476934 ~ 4477570 (+)
AMCG00006445 NA other downstream 195528 4524806 ~ 4527738 (+)
G109781 NA other downstream 695617 5024895 ~ 5025906 (+)
G109795 wasl,wasla,LOC105018628 other downstream 751603 5080881 ~ 5098698 (+)
AMCG00006460 wasl,wasla,LOC107698525 other downstream 764993 5094271 ~ 5107022 (+)

Expression


Co-expression Network