G109692


Basic Information

Item Value
gene id G109692
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4344387 ~ 4349812 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137350
TGCATATCCCAGCAGATAAGAGATTGAATCAAGAGTGCATTGGGAAATTAGAAATGCACCGCCGCTGTGAGGCAATCATCGCAGTATCTCATGATTCCCGCATGAAATGAACCGGGGGGACCGTTTCACACGTCTCAGATTGGCGCTTTGCTTTGTCTTTCAAACGGGTCCTATCCCCCCCACACCTGTGTTGAAAGAGGGAAGTCGCGGTTCCTGGTTTTAAAGGGGACACTTTCCCCAGATAAAAACCTCAAGAGGCAGAtgcacaggcacacaggaaTCACACCGAGGGTCGCGCCTGAGGCTCCGCAGAAACGCGCTCTTCACACGCAGGCCGGACACTCGACAAGAAGCCCAGTTTAATCCGCAATTCGCCGCTGTGGCGACTCGGGCTGCAGCCATGGATGAATGAACGCGTTACCGTTAAAGACGAGCACAAACATGGACGGACACGGACTGCATGCCGTGACTGGCCGCTCAGCTGCTTTCCTGCCCCTGTCCAGAGACGCAGCCGTGTTTACCAGCGTGCGGCTCACACGCCACTCCGCCCAGGACAAGCGCCCCATCCCGGCGATCGCACCGACACTCACCGGTAGCCGCCGAGGATCGTAAGGATTGCGGTCCCAGCGCAGCAGCACACcgctgaagaagaagaaaagcgCTACGGTGATTTGGACAGAGAAAGAGCAGAGATGACTTCATCGATTGATATCCCCCCATCTGTGACGAGGAGACATTGTAACCTGCGCTCTGCAATTACCCTGACAACAACACTGCCATTATCTCGACGTTTCAAAGACGCAGCTTCTTCCCAATGCGCACCCCCGCTGCTCGACAACTCTCCTCCCTTCTTCTCCTACAGCTGTTGATGCTATTccaacacacagagagagatggggatggagagagagagggaagagcaATCAAGCCCATTTCCTGAATTGTGCTGAATTTCCACATGAGTACAGGGAAACGATCATTAGAAAGTCACACACAGACCGTCCTACTACATTATATATCTGAAGCACCCGACTGTTGGTCTAGATCTCAGGATTTCAGCTGTGATTCTGTTTTCCCATTGTAACCCTGTGAACATCAAACATGAACAGTTGTATCTCATCGATCTCCTCAATGAATTACTagctcatattattattattattattattattattattattattattattgcaacaGTTCTATGATATTTAGTCTATTATTTGTGGCTTCATGCACTTCATTGGATCTGGGTATTCGAATAACTGATTTAGTAGGacatctgtgttttaaattgaaaacaaaccgAAACAGATGCACGGTCATTTAAGACAAGCAGGCGAGAGCAATGCCTCGTCCCTGTGCAGGTGACGTCACATGTGACCGCTGTGCAGGCGGCTTGCTGTGGCCGCATTGTGATAATACCGGTACAATTATGCAGTTTGTCTTGGGTGACGACATGTGTAAGTCGCTCGATGTCTGGGCTTGTTGTATGTGTAACTGTGTGCTACGAgcttaaatacagaaataagtTCAACCAAAAGAACGGATAGGCTACACCCATAACATAAGTCGTGTCTGACCCATTTGCTCACATAATACCATTGTAACTACTTGAACTGCACCATTCCACATTTGCATGAGTCAAATTGCCTATTCTGTATAACTTAGTATGAAACCGATAACACGTCGCTCCAGAATACCATTTAAGAAGACTAAGTGTACATGTTGAAAACTGTCAAAATGCAGAGTGGTTTATGTTTAGTTGTGTTCGTGCAGACTATTGTATCGTGGCATATATGTTccaatgaagaaaaatacatgagcACAAAAATAAACCCCACGCTGTGACACATTTAGAAATGCCcgggtttttattttcatctctttctctgttCATTTTCTCTCAGTATTGTGCAGTGCCGTTTCTCTGCAAAGCAAAGAGTCATGCGCGTACACAAGCTCCTGCGGTGAGGTCATCG

Function

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137350 True 1979 lncRNA 0.47 2 4344387 4349812

Neighbor

gene id symbol gene type direction distance location
AMCG00006437 zgc:153426,LOC107393497,LOC106534675,LOC100712088,LOC102780606,LOC103367161,LOC107711200 coding downstream 8205 4335672 ~ 4336182 (-)
AMCG00006435 NA coding downstream 13469 4314722 ~ 4330918 (-)
AMCG00006428 NA coding downstream 92664 4245185 ~ 4251723 (-)
AMCG00006427 NA coding downstream 101828 4233664 ~ 4242559 (-)
AMCG00006430 NA coding downstream 113862 4222078 ~ 4230525 (-)
AMCG00006434 NA coding upstream 17438 4367250 ~ 4368596 (-)
AMCG00006436 NA coding upstream 26869 4376681 ~ 4387311 (-)
AMCG00006440 NA coding upstream 71217 4421029 ~ 4430984 (-)
AMCG00006439 NA coding upstream 89988 4439800 ~ 4441434 (-)
AMCG00006441 NA coding upstream 105069 4454881 ~ 4476647 (-)
G109689 NA non-coding downstream 32436 4308173 ~ 4311951 (-)
G109616 NA non-coding downstream 75917 4266827 ~ 4268470 (-)
G109635 NA non-coding downstream 177148 4166951 ~ 4167239 (-)
G109634 NA non-coding downstream 177798 4166328 ~ 4166589 (-)
G109632 NA non-coding downstream 179830 4163982 ~ 4164557 (-)
G109735 NA non-coding upstream 164498 4514310 ~ 4515575 (-)
G109736 NA non-coding upstream 166125 4515937 ~ 4521369 (-)
G109761 NA non-coding upstream 397158 4746970 ~ 4747234 (-)
G109778 NA non-coding upstream 621052 4970864 ~ 4971188 (-)
G109782 NA non-coding upstream 670225 5020037 ~ 5020675 (-)
AMCG00006429 NA other downstream 67232 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 167335 4168050 ~ 4177052 (-)
G109633 NA other downstream 178787 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 186264 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 528870 3730042 ~ 3815517 (-)
AMCG00006476 NA other upstream 1227658 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 1664292 6014104 ~ 6042924 (-)
G110140 NA other upstream 2435501 6785313 ~ 6785851 (-)
G110195 NA other upstream 2728577 7078389 ~ 7107138 (-)
G110507 NA other upstream 4372576 8722388 ~ 8724352 (-)

Expression


Co-expression Network