G109721


Basic Information

Item Value
gene id G109721
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4518917 ~ 4521249 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137391
CTGAAGAGGCAAGGGGACTTTAGTGCAGTCCTCGCCTGCTGTGCCTCGGGGCTAGATGCCACCCCCTGTGCGCGAGACGCTTGGCTTGTCCTCCCGCTGGCCTTTAGTGCGACGGTCCCGCGGCGTCTCTCTGTTCAGCCCTGGAGCCTGCTTGAATTTctggtgtgtgttttgctttcaacATTTCGTCAGAGTGGGAAGGGGGGCGGTGTctggtttttaattatttgcaaagATGAGCCTTAAGTagatcatcattataataattctgtattatacttgagtgtttttttgttttcctgtctcaACCTGATGGGTCTAATTCGGTGGTTCtcaaccctagtcctggaggtgtccctaccctgctggttttgatTCCAattgagctcttaattacttaattggaccttaaaggtagggtatgcaatcttatccagaaacattttttgttatactggttgaaagtctcatCACAttctgatagcaatcaatactttaagtggtctaaatgtaaatatatatatatatatatatatatatcttctgtggaagggacaggactaaaaaagggtcgaccaatcattgcattcggtctgAAGGTAAtcataggatgtccttcctgtctgtcagtctATATTTGCGTACCGCCGCGaaacttgttcgcgcagacaatcacacgtcatcagcgcgggaaccttgactgtgcagagcgagcacgagaatggaaggcgagccgcagctactattaaaaaaaacattaaaaccgtaaataagatgtttatgctcggtattattgtaatgtctaacctgtgaatgagacatgagGTAACCTGAACCCGCTGCGATGGATTCCgcccacacgtctctcctcctggcgctgagactccgctctgtgtgcacatgtgtgatggagggggcgtggctttggagacgctgTGAAGCgagggctctatgctttcaaaacaagctgctactgctgcctctcaggattgcacaCCCTGCTTACTTGTGTtctgtaactgataaaaaagttggttccttaataagataagttcTACAAtgttatacaatgttatactaaacttaaaacccctactgtttaaaatcatgaaaaggctctgatttatgaaatgattcattcaattaagggttcaattaagtaattgagagctcggctggaacgaaaaccagcagggcaggggctcctccagggaCAGGGTAGGGAACCACTGGTCTAACTGCTCGATCGACAGTATATAAAATAGGAAAACGCACATCGGGTATGTTCAGTGCTGGATAGGAAGAGAATGTGGACGTGAACTTGTTTTACAGTCTGTATCTTCCGGTCGTTGTCCACATGCCGCCAGCGAGGGGGAACAGGAACACACCTGCAGTTGGAGACTAGAGACCCCAGTTTCCTTGTGTTCAGCGATGGACGAGATCCTCAATTAGTAAACCTGTTATTGGGATGTTGCTTTATAAACGGGCCGCACTGTTCGTGGCTGCTTCAGTCTCTGCTTTCTACCAGGATATGGCCATTGACCTGTAACAGGACAGTCGAGGGGTTTCACGTACACCACTTCACATGCAAACGGCTGCAGCCATAGGAAGGGGGTGGGGACAACTCTATGCCTTCTTTTGTACTTGTGTAACAGATGTAAATAAAGCTGACCAAACTTTGTAGAGGATAGTTTATACGGCATCATCTGTTCCTGCTGATTCTCAGTgaactggtgtgtgtgtttatttttttatgtttgttttctcttcccgATTGACaccttttcaatattatttatggCACCTTTAACAAACCCATGTGCTGGTTTGTCATGGATTGTGTTAACTGTTCTTGCACAAATACCGATTTGCACCCGCCACGTTGTGCTTTCCTGCGACGGATACAAAATACGAAACATAAAAACTTGGAGCGTGAGGAAAGAACTTTATTTTTgcgtttatttttgtgtattgcTATATTGTACGCTGGTTTCCTTTCGATTCTGTTGTGTTTAGGAACACTAAGAAACATCTGGGCACTTGCGAAAAAGtagatttgcttttgttttggtttcctaTTCGCAGTATCAGGTAGCACCTCCATCCCACCCTCTGGACGAGAGCAGACTGTGTCCGCAGTCGGTGTAAATATTCAGGATGTATGGCTTACTGAagggttacaaaaaaaaaaaatacagagagagaacaaacgATTGAATCGATACTGCCATGGTTCGGCCCCGACCGCAGAGCCCTCCTCTGACTGTGAGGggatcttttttgttttgttttgtatctggctttgtaaataaaataatttatatgttTGTAAG

Function

NR:

description
protein lifeguard 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137391 True 2333 lncRNA 0.44 1 4518917 4521249

Neighbor

gene id symbol gene type direction distance location
AMCG00006444 NA coding upstream 2834 4496406 ~ 4516083 (+)
AMCG00006446 NA coding upstream 22543 4488497 ~ 4496374 (+)
AMCG00006438 NA coding upstream 68448 4441961 ~ 4450469 (+)
AMCG00006433 NA coding upstream 158721 4351652 ~ 4360196 (+)
AMCG00006432 NA coding upstream 252674 4254334 ~ 4266243 (+)
AMCG00006442 NA coding downstream 20863 4542112 ~ 4562075 (+)
AMCG00006443 grm8,grm8a,LOC108412277 coding downstream 49275 4570524 ~ 4571515 (+)
AMCG00006450 LOC107389496,LOC106561032 coding downstream 93943 4615192 ~ 4632996 (+)
AMCG00006449 LOC105007228,LOC106561032,LOC107584025 coding downstream 142253 4663502 ~ 4678336 (+)
AMCG00006451 grm8 coding downstream 178417 4699666 ~ 4706437 (+)
G109713 NA non-coding upstream 45909 4468391 ~ 4473008 (+)
G109655 NA non-coding upstream 141540 4374148 ~ 4377377 (+)
G109662 tubb,LOC108432309 non-coding upstream 183467 4334323 ~ 4335450 (+)
G109660 NA non-coding upstream 189639 4328869 ~ 4329278 (+)
G109656 NA non-coding upstream 202452 4314631 ~ 4316465 (+)
G109767 NA non-coding downstream 401883 4923132 ~ 4924794 (+)
G109779 NA non-coding downstream 496840 5018089 ~ 5020403 (+)
G109780 NA non-coding downstream 500047 5021296 ~ 5022178 (+)
G109786 NA non-coding downstream 523167 5044416 ~ 5044633 (+)
G109837 NA non-coding downstream 831207 5352456 ~ 5353170 (+)
G109714 NA other upstream 41347 4476934 ~ 4477570 (+)
AMCG00006413 NA other upstream 350965 4159523 ~ 4167952 (+)
G109570 NA other upstream 363168 4152816 ~ 4155749 (+)
G109538 NA other upstream 554921 3963597 ~ 3963996 (+)
AMCG00006393 ppp1r11,LOC107711309 other upstream 654185 3858934 ~ 3864732 (+)
AMCG00006445 NA other downstream 3557 4524806 ~ 4527738 (+)
G109781 NA other downstream 503646 5024895 ~ 5025906 (+)
G109795 wasl,wasla,LOC105018628 other downstream 559632 5080881 ~ 5098698 (+)
AMCG00006460 wasl,wasla,LOC107698525 other downstream 573022 5094271 ~ 5107022 (+)
AMCG00006459 NA other downstream 606108 5127357 ~ 5134715 (+)

Expression


Co-expression Network