Gene
RNA
| Item | Value |
|---|---|
| gene id | G109767 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 4923132 ~ 4924794 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU137446 | True | 330 | lncRNA | 0.48 | 2 | 4923132 | 4924794 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006451 | grm8 | coding | upstream | 216695 | 4699666 ~ 4706437 (+) |
| AMCG00006449 | LOC105007228,LOC106561032,LOC107584025 | coding | upstream | 244796 | 4663502 ~ 4678336 (+) |
| AMCG00006450 | LOC107389496,LOC106561032 | coding | upstream | 290136 | 4615192 ~ 4632996 (+) |
| AMCG00006443 | grm8,grm8a,LOC108412277 | coding | upstream | 351617 | 4570524 ~ 4571515 (+) |
| AMCG00006442 | NA | coding | upstream | 361057 | 4542112 ~ 4562075 (+) |
| AMCG00006454 | NA | coding | downstream | 2049 | 4926843 ~ 4930909 (+) |
| AMCG00006452 | NA | coding | downstream | 36412 | 4961206 ~ 4968033 (+) |
| AMCG00006455 | NA | coding | downstream | 90852 | 5015646 ~ 5016686 (+) |
| AMCG00006461 | NA | coding | downstream | 154956 | 5079750 ~ 5090677 (+) |
| AMCG00006458 | NA | coding | downstream | 214748 | 5139542 ~ 5149792 (+) |
| G109721 | NA | non-coding | upstream | 401883 | 4518917 ~ 4521249 (+) |
| G109713 | NA | non-coding | upstream | 450124 | 4468391 ~ 4473008 (+) |
| G109655 | NA | non-coding | upstream | 545755 | 4374148 ~ 4377377 (+) |
| G109662 | tubb,LOC108432309 | non-coding | upstream | 587682 | 4334323 ~ 4335450 (+) |
| G109660 | NA | non-coding | upstream | 593854 | 4328869 ~ 4329278 (+) |
| G109779 | NA | non-coding | downstream | 93295 | 5018089 ~ 5020403 (+) |
| G109780 | NA | non-coding | downstream | 96502 | 5021296 ~ 5022178 (+) |
| G109786 | NA | non-coding | downstream | 119622 | 5044416 ~ 5044633 (+) |
| G109837 | NA | non-coding | downstream | 427662 | 5352456 ~ 5353170 (+) |
| G109933 | NA | non-coding | downstream | 621413 | 5546207 ~ 5546436 (+) |
| AMCG00006445 | NA | other | upstream | 395394 | 4524806 ~ 4527738 (+) |
| G109714 | NA | other | upstream | 445562 | 4476934 ~ 4477570 (+) |
| AMCG00006413 | NA | other | upstream | 755180 | 4159523 ~ 4167952 (+) |
| G109570 | NA | other | upstream | 767383 | 4152816 ~ 4155749 (+) |
| G109538 | NA | other | upstream | 959136 | 3963597 ~ 3963996 (+) |
| G109781 | NA | other | downstream | 100101 | 5024895 ~ 5025906 (+) |
| G109795 | wasl,wasla,LOC105018628 | other | downstream | 156087 | 5080881 ~ 5098698 (+) |
| AMCG00006460 | wasl,wasla,LOC107698525 | other | downstream | 169477 | 5094271 ~ 5107022 (+) |
| AMCG00006459 | NA | other | downstream | 202563 | 5127357 ~ 5134715 (+) |
| G110023 | NA | other | downstream | 1054268 | 5979062 ~ 5982909 (+) |
