G109778


Basic Information

Item Value
gene id G109778
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 4970864 ~ 4971188 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137457
cacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacacacccagggacacaaatggaaattgggcttcaaggcattcaaggcagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactcccc

Function

GO:

id name namespace
GO:0050900 leukocyte migration biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0060326 cell chemotaxis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137457 True 325 lncRNA 0.48 1 4970864 4971188

Neighbor

gene id symbol gene type direction distance location
AMCG00006447 NA coding downstream 478334 4484214 ~ 4492530 (-)
AMCG00006448 NA coding downstream 486984 4483234 ~ 4483880 (-)
AMCG00006441 NA coding downstream 494217 4454881 ~ 4476647 (-)
AMCG00006439 NA coding downstream 529430 4439800 ~ 4441434 (-)
AMCG00006440 NA coding downstream 539880 4421029 ~ 4430984 (-)
AMCG00006457 NA coding upstream 46607 5017795 ~ 5051191 (-)
AMCG00006456 LOC108436892 coding upstream 92273 5063461 ~ 5067740 (-)
AMCG00006463 LOC107726005,LOC107656401,LOC107711505,LOC107581005 coding upstream 139974 5111162 ~ 5114090 (-)
AMCG00006462 NA coding upstream 144528 5115716 ~ 5123628 (-)
AMCG00006470 NA coding upstream 379016 5350204 ~ 5390268 (-)
G109761 NA non-coding downstream 223630 4746970 ~ 4747234 (-)
G109736 NA non-coding downstream 449495 4515937 ~ 4521369 (-)
G109735 NA non-coding downstream 455289 4514310 ~ 4515575 (-)
G109692 NA non-coding downstream 621052 4344387 ~ 4349812 (-)
G109689 NA non-coding downstream 658913 4308173 ~ 4311951 (-)
G109782 NA non-coding upstream 48849 5020037 ~ 5020675 (-)
G109815 NA non-coding upstream 165330 5136518 ~ 5136744 (-)
G109875 NA non-coding upstream 374495 5345683 ~ 5347227 (-)
G109878 NA non-coding upstream 438152 5409340 ~ 5409571 (-)
G109916 NA non-coding upstream 463749 5434937 ~ 5435764 (-)
AMCG00006429 NA other downstream 693709 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 793812 4168050 ~ 4177052 (-)
G109633 NA other downstream 805264 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 812741 4152816 ~ 4158123 (-)
AMCG00006398 NA other downstream 1155347 3730042 ~ 3815517 (-)
AMCG00006476 NA other upstream 606282 5577470 ~ 5603733 (-)
AMCG00006491 NA other upstream 1042916 6014104 ~ 6042924 (-)
G110140 NA other upstream 1814125 6785313 ~ 6785851 (-)
G110195 NA other upstream 2107201 7078389 ~ 7107138 (-)
G110507 NA other upstream 3751200 8722388 ~ 8724352 (-)

Expression


Co-expression Network