G109795 (wasl,wasla,LOC105018628)


Basic Information

Item Value
gene id G109795
gene name wasl,wasla,LOC105018628
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5080881 ~ 5098698 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137474
ACCCCTCCGCACACTGCAGCGGTGTTACCAAACCCACAGCAAACAGGAGCGGACCATTCTCTCAGCCCAGGAGGCGATTCCCCCGCCGCTGTGCGAAGCCGCTCCCGGGACACTGTTCATCCTTCTCAAGTGCGGAGGCTGTGCATTTTCCACAAACGTCCCTTTTTGCCAAACCACGGCTCTTTCTAAAGGCAGGACTACGAATTAAAAAATCCCCGTCTGCACCGTGAGGTTATCCCGCTTCTCCCCCCGCTTTCCTGGGAAGTGGTTGTGTCTTCCTGCTGCCATGTTGGAGTgagccgccgccgccgccgctcgCTGGAGTTGCCGTGAAAGTTTGCACTCGCCGCTCTCCCGGAGAAACCAGTGTCTGGGCCGACTGGGAGCGACTGGCGGGGCATTGGCGTCGTGTTTCCCCACCCATCCAGCCCGGAGGACCTGCGCCTCACCTCGGCATCTGGGGACAAGACAAGCCACCCCGCTGCAGCATCCATGAGCAGAGGCAGCGCCAGCGCCAGCGCAAGGCCACGCCGATCCATGCCTGCACACATCTGAGCGCACAGACTGGTTTTTATAGAGagatttagtgttttgtttttgcgtgtgtgttttggaggggtgggggtgggggggatacaATGAACAACCAACACCCGCAGCGGCGGATGGCGAACATCGGCTCCATACTCCTGACCCCGCAAGAAAACGACTGCCTCTTCAATTACCTCGGCAGGAAATGCATCACTCTGTCCTCGGCCGTGGTGCAGGTGTACGCGTCCGAGCGCAATGCCGTGTGGTCCAAGAAGTGCTGCGGTGTGGCCTGTCTGGTGAAGGACAATCCCCTGCGCTCGTACTTCATCAGGATATTCGATATCAAGGAAGGGAAGACGATGTGGGAGCAGGAACTCTACAACAACTTCAGTTACAGTTTTTCGAGACCGTACTTTCTCTCCTTCGTAGGGGACGCGTGTCAGGTTGGGCTTAACTTTGCGAGTGAAGAGGAAGCCAAGCGCTTCAGGTCAGCGGTTGGAGATCTGCTTGGACGGCGACAGAGAAGAACAGaaaaAAGACGCGACCCTCCAAATGGACCTGCATTGCCCATGGCCACAGTGGACATAAAGAATCCAGAAATCACGAACATGCGGTACTCGAACTCCCAACACGCTCCCAACAACATCCTGCACCCCAACCTCGTCAAGGACAAGAAGAAAGTCAAGGGGAAAAAGAAGAAGTTGACCAAGGCAGACATCGGGACCCCCAGCAACTTCCAgcACATTGGACACGTTGGCTGGGATCCAAACACAGGCTTTGATCTGAATAATTTAGACCCGGAGCTGAAGAACCTGTTTGATATGTGTGGGATCTCGGAGGCACAGctgaaagacaaagaaacatCCAAAGTGATCTACGACTTCATCGAGAAGAAGGGCGGGGTGGAGGCGGTAAAGAATGAGCTGCGCAGGCAAGccCCCCCACCGCCCCCGTCTCGAGGAGGccctcct
>TU137475
ACCCCTCCGCACACTGCAGCGGTGTTACCAAACCCACAGCAAACAGGAGCGGACCATTCTCTCAGCCCAGGAGGCGATTCCCCCGCCGCTGTGCGAAGCCGCTCCCGGGACACTGTTCATCCTTCTCAAGTGCGGAGGCTGTGCATTTTCCACAAACGTCCCTTTTTGCCAAACCACGGCTCTTTCTAAAGGCAGGACTACGAATTAAAAAATCCCCGTCTGCACCGTGAGGTTATCCCGCTTCTCCCCCCGCTTTCCTGGGAAGTGGTTGTGTCTTCCTGCTGCCATGTTGGAGTgagccgccgccgccgccgctcgCTGGAGTTGCCGTGAAAGTTTGCACTCGCCGCTCTCCCGGAGAAACCAGTGTCTGGGCCGACTGGGAGCGACTGGCGGGGCATTGGCGTCGTGTTTCCCCACCCATCCAGCCCGGAGGACCTGCGCCTCACCTCGGCATCTGGGGACAAGACAAGCCACCCCGCTGCAGCATCCATGAGCAGAGGCAGCGCCAGCGCCAGCGCAAGGCCACGCCGATCCATGCCTGCACACATCTGAGCGCACAGACTGGTTTTTATAGAGagatttagtgttttgtttttgcgtgtgtgttttggaggggtgggggtgggggggatacaATGAACAACCAACACCCGCAGCGGCGGATGGCGAACATCGGCTCCATACTCCTGACCCCGCAAGAAAACGACTGCCTCTTCAATTACCTCGGCAGGAAATGCATCACTCTGTCCTCGGCCGTGGTGCAGGTGTACGCGTCCGAGCGCAATGCCGTGTGGTCCAAGAAGTGCTGCGGTGTGGCCTGTCTGGTGAAGGACAATCCCCTGCGCTCGTACTTCATCAGGATATTCGATATCAAGGAAGGGAAGACGATGTGGGAGCAGGAACTCTACAACAACTTCAGTTACAGTTTTTCGAGACCGTACTTTCTCTCCTTCGTAGGGGACGCGTGTCAGGTTGGGCTTAACTTTGCGAGTGAAGAGGAAGCCAAGCGCTTCAGGTCAGCGGTTGGAGATCTGCTTGGACGGCGACAGAGAAGAACAGGACCTGCATTGCCCATGGCCACAGTGGACATAAAGAATCCAGAAATCACGAACATGCGGTACTCGAACTCCCAACACGCTCCCAACAACATCCTGCACCCCAACCTCGTCAAGGACAAGAAGAAAGTCAAGGGGAAAAAGAAGAAGTTGACCAAGGCAGACATCGGGACCCCCAGCAACTTCCAgcACATTGGACACGTTGGCTGGGATCCAAACACAGGCTTTGATCTGAATAATTTAGACCCGGAGCTGAAGAACCTGTTTGATATGTGTGGGATCTCGGAGGCACAGctgaaagacaaagaaacatCCAAAGTGATCTACGACTTCATCGAGAAGAAGGGCGGGGTGGAGGCGGTAAAGAATGAGCTGCGCAGGCAAGccCCCCCACCGCCCCCGTCTCGAGGAGGccctcct

Function

symbol description
wasla Predicted to enable actin binding activity. Acts upstream of or within macrophage differentiation and thrombocyte differentiation. Predicted to be located in nucleus. Predicted to be active in actin filament. Is expressed in caudal fin. Orthologous to human WASL (WASP like actin nucleation promoting factor).
wasl Predicted to enable identical protein binding activity. Involved in several processes, including actin filament polymerization; negative regulation of lymphocyte migration; and negative regulation of membrane tubulation. Located in cytosol and nucleus.

NR:

description
PREDICTED: neural Wiskott-Aldrich syndrome protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137474 True 1502 TUCP 0.56 9 5080881 5098698
TU137475 False 1478 TUCP 0.57 8 5080881 5098698

Neighbor

gene id symbol gene type direction distance location
AMCG00006455 NA coding upstream 64195 5015646 ~ 5016686 (+)
AMCG00006452 NA coding upstream 112848 4961206 ~ 4968033 (+)
AMCG00006454 NA coding upstream 149972 4926843 ~ 4930909 (+)
AMCG00006453 NA coding upstream 154101 4921018 ~ 4926780 (+)
AMCG00006451 grm8 coding upstream 374444 4699666 ~ 4706437 (+)
AMCG00006458 NA coding downstream 40844 5139542 ~ 5149792 (+)
AMCG00006468 NA coding downstream 57900 5156598 ~ 5181731 (+)
AMCG00006464 NA coding downstream 111330 5210028 ~ 5231466 (+)
AMCG00006467 NA coding downstream 145080 5243778 ~ 5301376 (+)
AMCG00006466 NA coding downstream 209799 5308497 ~ 5311416 (+)
G109786 NA non-coding upstream 36248 5044416 ~ 5044633 (+)
G109780 NA non-coding upstream 58703 5021296 ~ 5022178 (+)
G109779 NA non-coding upstream 60478 5018089 ~ 5020403 (+)
G109767 NA non-coding upstream 156087 4923132 ~ 4924794 (+)
G109721 NA non-coding upstream 559632 4518917 ~ 4521249 (+)
G109837 NA non-coding downstream 253758 5352456 ~ 5353170 (+)
G109933 NA non-coding downstream 447509 5546207 ~ 5546436 (+)
G109978 NA non-coding downstream 700902 5799600 ~ 5804559 (+)
G110024 NA non-coding downstream 885092 5983790 ~ 5984250 (+)
G110081 NA non-coding downstream 1119833 6218531 ~ 6220086 (+)
G109781 NA other upstream 54975 5024895 ~ 5025906 (+)
AMCG00006445 NA other upstream 553143 4524806 ~ 4527738 (+)
G109714 NA other upstream 603311 4476934 ~ 4477570 (+)
AMCG00006413 NA other upstream 912929 4159523 ~ 4167952 (+)
G109570 NA other upstream 925132 4152816 ~ 4155749 (+)
AMCG00006459 NA other downstream 28659 5127357 ~ 5134715 (+)
G110023 NA other downstream 880364 5979062 ~ 5982909 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other downstream 1421167 6519865 ~ 6588399 (+)
G110163 LOC100846954 other downstream 1813178 6911876 ~ 6912254 (+)
G110279 NA other downstream 2554974 7653672 ~ 7655194 (+)

Expression


Co-expression Network