G110015


Basic Information

Item Value
gene id G110015
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 5853814 ~ 5855502 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137753
TTTATTTAAATCCGCATCTGGCATTAAAAGTTAGGTGTCTTCGGCAACAAAAATTCTGGATGAGAAACCATACTCCTATATACATAAAGCTTTCGACATATTAAAACTCAAAACCCAGACCAGAAAGGTAACGTTGGACCGAGATCAGCATCTGCGTCTACAGTACGAGTCATACAGGCACAGTGTTACGTTTCTTTCCTGTACACCGGTACAGCCGACACCCGAACCAGGGCAACGTTTCGTGAGATGAAGCACTACGGTTAGATGCATTCAGAAGACTTAGCAGCATGTTTAAGAGTTCAGAGACACTAGGTTAACAGCCTCATGtggaaaagcacacacacactcacacagaagaCATTTTGTCGGttaaattacaaagaaaatccTTGAACGGACAGAGACGACAAATATCTGACGTTATACCTGTACTGGGCCAAAATACTGCtattattaagaacataaaagcCAACTATGTTTTATCTACGGGTACGGCAAGCAGAGAGCGTCTGGAGAACGTTGACAGTTTCACACACTTTGGTCACCAGTCCTTTGTAATTGCGAACAGGACAGCACACCGTAGAGAGACGTTAGTTAAGAGCGTTGTGGtttaatcattatattttgCGACTATAAGATAATGTGGCTTGAGTTGCTTCCACTGCTTCTAATCTAACGAGTGGGATTACGTGGACTGCCACGGCGGTTTTATCCAGGAAGACCAGCTTAAGGATAAGAGACGCACAGTCACTCAAACTCGCTCAGAGCGCCATGCGGTGAGTTGCGGTCGTTACATAGATGACCGGACCTCCTCAGATCGAAGCTGCTACTTTGCGTTGCTGTACACACGACCACTGAGAGCACAGAGACACCCTGTCCGACGGGGCTGGGAAGCTGCTGCAAAGAATTAAAGGTGTTAGAGCCGAGTTGTGCAGCTTGGCAGCCGGTTCGGTCGCCTTCGATCCAGTCTTCGGCCGTATCACCACAAAGTGCGCAGTGCTGCTCGCCTTCGAGGTGCCACGCTGCCAACGTCATCCGTCGCATCCGGAGTATCGGCCACCTGTCCGTCCAGCATTCCCCGGGCTCGCCATATCTTTACAGTTCGATCGctattgaaaaatgaaatgttaaaagaggatgaattaattaaataacatttggGAAAGGTGCTGACAGAAGGTCCACAAACAAGGTGTGATTTCATTTCAAACATATAAGTGACTGGGAGCTGATAAGTAAGCACACATAGGCTGGCAGCGATCATGGAAAAATTACTTAAATCAGCCATCACAGATCTACTGAGAGACTGTAGTTTCCTTCAGGCCAGTGTTGGTGTCAGCACCtcatatacagacgggtgacaaattaaaggaaaaaccaacaaagtgtctctgtaaggtgttgggcaccacgagccgccagaacagcttcaatgctcttggcacagattgtatgagtctctggactctactggagggatgaacaccattcttccaaaagatattccctcatttggggttttgatgatggtggtggagagcgctgtctaacacgtcggtccaaaatctcccatagatgttcaattgggttgaggtctggtgactgtgaaggctatagcatatgattcacatcattgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137753 True 1639 lncRNA 0.46 2 5853814 5855502

Neighbor

gene id symbol gene type direction distance location
AMCG00006481 NA coding downstream 70669 5772245 ~ 5783145 (-)
AMCG00006482 NA coding downstream 156158 5664975 ~ 5697656 (-)
AMCG00006477 NA coding downstream 196693 5653275 ~ 5657121 (-)
AMCG00006472 NA coding downstream 301957 5550817 ~ 5551857 (-)
AMCG00006474 NA coding downstream 319767 5518671 ~ 5534047 (-)
AMCG00006486 NA coding upstream 123625 5979127 ~ 5984291 (-)
AMCG00006492 NA coding upstream 131148 5986650 ~ 5991143 (-)
AMCG00006490 NA coding upstream 139312 5994814 ~ 6001150 (-)
AMCG00006493 celsr1,LOC108427079 coding upstream 195825 6051327 ~ 6067994 (-)
AMCG00006496 LOC106576003 coding upstream 235723 6091225 ~ 6097143 (-)
G109996 NA non-coding downstream 49362 5803498 ~ 5804452 (-)
G109995 NA non-coding downstream 50553 5802572 ~ 5803261 (-)
G109916 NA non-coding downstream 418050 5434937 ~ 5435764 (-)
G109878 NA non-coding downstream 444243 5409340 ~ 5409571 (-)
G109875 NA non-coding downstream 506587 5345683 ~ 5347227 (-)
G110152 NA non-coding upstream 964736 6820238 ~ 6820568 (-)
G110165 LOC100846954 non-coding upstream 1056374 6911876 ~ 6912252 (-)
G110168 NA non-coding upstream 1081911 6937413 ~ 6937803 (-)
G110169 NA non-coding upstream 1088685 6944187 ~ 6944474 (-)
G110202 NA non-coding upstream 1287752 7143254 ~ 7143678 (-)
AMCG00006476 NA other downstream 250081 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 1576659 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 1676762 4168050 ~ 4177052 (-)
G109633 NA other downstream 1688214 4164934 ~ 4165600 (-)
AMCG00006414 NA other downstream 1695691 4152816 ~ 4158123 (-)
AMCG00006491 NA other upstream 158602 6014104 ~ 6042924 (-)
G110140 NA other upstream 929811 6785313 ~ 6785851 (-)
G110195 NA other upstream 1222887 7078389 ~ 7107138 (-)
G110507 NA other upstream 2866886 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 2928403 8783905 ~ 8794062 (-)

Expression


Co-expression Network