G110147


Basic Information

Item Value
gene id G110147
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 6795749 ~ 6795994 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137910
GTCTTTCTGCTGTTGCCAAGTTTTCTGATGACTGTTTTCCAGGTAAACATGCCATAAAGCTGTGAGATAAGAAGTGCAAATGGTTTTAGCACTTAATCTGGTGTCAATCActacaaaacatgaaatgccCCACAGTTTGCTTTCATCAAGGGTAACAGAGATGTATATTGATTGGATAACCCCCGTTCACTAGTGTATCTGAAACAGGATTGACCATACAATAAGTGTGTAGACAGACACTTCACT

Function

NR:

description
PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like

GO:

id name namespace
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0003954 NADH dehydrogenase activity molecular_function
GO:0050136 NADH dehydrogenase (quinone) activity molecular_function
GO:0016651 oxidoreductase activity, acting on NAD(P)H molecular_function
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor molecular_function

KEGG:

id description
ko05012 Parkinson disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU137910 True 246 lncRNA 0.39 1 6795749 6795994

Neighbor

gene id symbol gene type direction distance location
AMCG00006505 NA coding upstream 2581 6786854 ~ 6793168 (+)
AMCG00006504 NA coding upstream 12385 6777971 ~ 6783364 (+)
AMCG00006500 tbc1d22a coding upstream 460906 6287734 ~ 6334843 (+)
AMCG00006499 tbc1d22a coding upstream 528613 6254988 ~ 6267136 (+)
AMCG00006497 NA coding upstream 561596 6222817 ~ 6234153 (+)
AMCG00006510 NA coding downstream 220825 7016819 ~ 7029460 (+)
AMCG00006511 NA coding downstream 261644 7057638 ~ 7058515 (+)
AMCG00006508 NA coding downstream 313350 7109344 ~ 7116757 (+)
AMCG00006509 NA coding downstream 353311 7149305 ~ 7183103 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding downstream 430139 7226133 ~ 7235139 (+)
G110081 NA non-coding upstream 575663 6218531 ~ 6220086 (+)
G110024 NA non-coding upstream 811499 5983790 ~ 5984250 (+)
G109978 NA non-coding upstream 991190 5799600 ~ 5804559 (+)
G109933 NA non-coding upstream 1249313 5546207 ~ 5546436 (+)
G109837 NA non-coding upstream 1442579 5352456 ~ 5353170 (+)
G110161 NA non-coding downstream 59886 6855880 ~ 6857998 (+)
G110167 NA non-coding downstream 141250 6937244 ~ 6937664 (+)
G110201 NA non-coding downstream 347273 7143267 ~ 7143659 (+)
G110240 NA non-coding downstream 444092 7240086 ~ 7240557 (+)
G110245 NA non-coding downstream 531036 7327030 ~ 7333170 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 207350 6519865 ~ 6588399 (+)
G110023 NA other upstream 812840 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 1661034 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 1688727 5094271 ~ 5107022 (+)
G109795 wasl,wasla,LOC105018628 other upstream 1697051 5080881 ~ 5098698 (+)
G110163 LOC100846954 other downstream 115882 6911876 ~ 6912254 (+)
G110279 NA other downstream 857678 7653672 ~ 7655194 (+)
G110445 NA other downstream 1379766 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1914756 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 2767958 9563952 ~ 9568276 (+)

Expression


Co-expression Network