G110195


Basic Information

Item Value
gene id G110195
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7078389 ~ 7107138 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137983
CCAGAATCTATGTAGCCAATCTGAATAGTATCACAACATGTAGATAGTAGATCCGATCTGGTTATTGTGTATTTAGTAGAGTTTGTTCTTCAGATTATATCTACACTATGCACACTACAcctcatgttttgcttttctataTGTACTAACTCAGTGGTCATATTGCAGGTCAATAACAGCAATGGCTGGAAAGGGTTCCTGTCCCCTGATCACCATACAGCCCTCAAGAGGACTCATAGATGAGAAGTTTCAAATCACTGTGAAGAATTTACTGCCAGGACAAGCCGTCACCCTGCACTCTCTGACTCAGTCCGAGGACAGTGACTTCTGGGAGGCATTTGGGCACTATGTCAGTGACGGTAAAGGGACAGTGAAAGTCGCTGAAGATGTGAGTCTAGGAGGCTCGTATGATGGCCTTGAGCCCATGGGTCTGCTGTGGAGTATGAAGCCAGCGCCTGGAAGTAGACCAGGACTTAGGTTCAGAAAGACAGATGTGTGCACCCCAGTGGTTGTGCGCATTGCTGTGTATACAGGGCACATCGGGGATGGATTCACAGAGGCGTCTGCTCTGGCCCGTGCTGTTACTGAGCGCTCGTACATGGCACCAGGCGTCCGCAGGACTGACATCAGGCAGAGTGGACTACGAGGAACCCTCTTTGTGCCACCAgGTCTTGGCCCGTTTCCTGCTGTTCTGGACTTGTGGGGCGCCGGAGGGCTGGTTGAGTACCGCCCTGCTCTCCTCGCATCTCATGGCTACGTGTCTCTGGCTATGGAC
>TU137984
CTTAACTCTTTTAACTGGAATATCCAGACTTTTAGGATTGACTATGTTTGTCTCTCTGACTTTGTTAAATCAAATACGTATATGCAGCTATTAAAATGGTTATATGTTTCTTAgcattattttaacacttgcCAAAGTTTGTTCAGGGGAATTAATCAAATgtcagtttgatttatttgaagacACAGAATCTATGTAGCTGATCTGATTAGTATCACAAAACGTCAATAACAGCAATGGCTGGAAAGGGTTCCTGTCCCCTGATCACCATACAGCCCTCAAGAGGACTCATAGATGAGAAGTTTCAAATCACTGTGAAGAATTTACTGCCAGGACAAGCCGTCACCCTGCACTCTCTGACTCAGTCCGAGGACAGTGACTTCTGGGAGGCATTTGGGCACTATGTCAGTGACGGTAAAGGGACAGTGAAAG

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU137983 True 775 TUCP 0.51 4 7078389 7088985
TU137984 False 432 lncRNA 0.40 2 7106581 7107138

Neighbor

gene id symbol gene type direction distance location
AMCG00006507 NA coding downstream 73516 6997547 ~ 7004873 (-)
AMCG00006506 pim3 coding downstream 217874 6855736 ~ 6860515 (-)
AMCG00006503 NA coding downstream 298925 6778367 ~ 6779464 (-)
AMCG00006502 NA coding downstream 309598 6754781 ~ 6768791 (-)
AMCG00006498 NA coding downstream 860881 6191972 ~ 6217508 (-)
AMCG00006514 NA coding upstream 79549 7186687 ~ 7195504 (-)
AMCG00006520 phtf2 coding upstream 486149 7593287 ~ 7621049 (-)
AMCG00006522 rsbn1l,LOC108279531,LOC107569939,LOC106561326 coding upstream 548714 7655852 ~ 7666518 (-)
AMCG00006524 NA coding upstream 560482 7667620 ~ 7688311 (-)
AMCG00006523 NA coding upstream 587402 7694540 ~ 7718823 (-)
G110169 NA non-coding downstream 133915 6944187 ~ 6944474 (-)
G110168 NA non-coding downstream 140586 6937413 ~ 6937803 (-)
G110165 LOC100846954 non-coding downstream 166137 6911876 ~ 6912252 (-)
G110152 NA non-coding downstream 257821 6820238 ~ 6820568 (-)
G110015 NA non-coding downstream 1222887 5853814 ~ 5855502 (-)
G110202 NA non-coding upstream 36116 7143254 ~ 7143678 (-)
G110204 NA non-coding upstream 38419 7145557 ~ 7185532 (-)
G110259 magi2,LOC107101701 non-coding upstream 377004 7484142 ~ 7484368 (-)
G110261 NA non-coding upstream 382120 7489258 ~ 7489469 (-)
G110262 NA non-coding upstream 399961 7507099 ~ 7507347 (-)
G110140 NA other downstream 292538 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 1035465 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 1474656 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 2801234 4270416 ~ 4277155 (-)
AMCG00006415 NA other downstream 2901337 4168050 ~ 4177052 (-)
G110507 NA other upstream 1615250 8722388 ~ 8724352 (-)
G110520 bmt2 other upstream 1676767 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 1890499 8997637 ~ 8999264 (-)
G110605 NA other upstream 2438357 9545495 ~ 9560104 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 2980137 10087275 ~ 10107285 (-)

Expression


Co-expression Network