G110201


Basic Information

Item Value
gene id G110201
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7143267 ~ 7143659 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU137991
tccagaaaaacgcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgatcccctatcaatcagcaagatttctggctcccaggtgtcttttatgcaggtaacgagctgagattaggagcactctcttaaagggagtgctcctaatctcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccatcatggccaagaccaaagagctgtccagggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttgatGCGATTATTctcaaatggaagaaacacaaaataac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137991 True 393 lncRNA 0.42 1 7143267 7143659

Neighbor

gene id symbol gene type direction distance location
AMCG00006508 NA coding upstream 26510 7109344 ~ 7116757 (+)
AMCG00006511 NA coding upstream 84752 7057638 ~ 7058515 (+)
AMCG00006510 NA coding upstream 113807 7016819 ~ 7029460 (+)
AMCG00006505 NA coding upstream 350099 6786854 ~ 6793168 (+)
AMCG00006504 NA coding upstream 359903 6777971 ~ 6783364 (+)
AMCG00006509 NA coding downstream 5646 7149305 ~ 7183103 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding downstream 82474 7226133 ~ 7235139 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding downstream 146345 7290004 ~ 7290669 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding downstream 340485 7484144 ~ 7490138 (+)
AMCG00006518 NA coding downstream 398154 7541813 ~ 7577273 (+)
G110167 NA non-coding upstream 205603 6937244 ~ 6937664 (+)
G110161 NA non-coding upstream 285269 6855880 ~ 6857998 (+)
G110147 NA non-coding upstream 347273 6795749 ~ 6795994 (+)
G110081 NA non-coding upstream 923181 6218531 ~ 6220086 (+)
G110024 NA non-coding upstream 1159017 5983790 ~ 5984250 (+)
G110240 NA non-coding downstream 96427 7240086 ~ 7240557 (+)
G110245 NA non-coding downstream 183371 7327030 ~ 7333170 (+)
G110243 NA non-coding downstream 449628 7593287 ~ 7633119 (+)
G110286 NA non-coding downstream 550895 7694554 ~ 7695513 (+)
G110361 NA non-coding downstream 770191 7913850 ~ 7914828 (+)
G110163 LOC100846954 other upstream 231013 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 554868 6519865 ~ 6588399 (+)
G110023 NA other upstream 1160358 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2008552 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 2036245 5094271 ~ 5107022 (+)
G110279 NA other downstream 510013 7653672 ~ 7655194 (+)
G110445 NA other downstream 1032101 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1567091 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 2420293 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 5002086 12145745 ~ 12323278 (+)

Expression


Co-expression Network