G110240


Basic Information

Item Value
gene id G110240
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7240086 ~ 7240557 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138035
AGGAAATCTAtggatcgaagcaagtggaaacctCTAGGGAAGGCCTTCGTTCGGCTGTGGCTCTATACAGGACGCTGCTGTTGATAATAGATATGATACTTTGTTAAAATCATACAACCGACGCCTTTTTAGCACAACCTAaaagaggggcaaggaggaagcctataAGAACTGGTacatacaagatctgggggagctcaggatcccatgatgggacccacctccggggacggtcagttccccctgctggagcccgagtccaagatcttttaattattttatggatgattgtttttaaaacgattttaaaaatgaatcttaattgtttttaaagatttagttgtttttaaatcactaattgttttaggggttttttggttttgttttgttatattcttttgtcaaatacattgtccgtcttggatttaattttaaatgcattggaccttttttgtttgttttttatttttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138035 True 472 lncRNA 0.38 1 7240086 7240557

Neighbor

gene id symbol gene type direction distance location
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding upstream 4947 7226133 ~ 7235139 (+)
AMCG00006509 NA coding upstream 56983 7149305 ~ 7183103 (+)
AMCG00006508 NA coding upstream 123329 7109344 ~ 7116757 (+)
AMCG00006511 NA coding upstream 181571 7057638 ~ 7058515 (+)
AMCG00006510 NA coding upstream 210626 7016819 ~ 7029460 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding downstream 49447 7290004 ~ 7290669 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding downstream 243587 7484144 ~ 7490138 (+)
AMCG00006518 NA coding downstream 301256 7541813 ~ 7577273 (+)
AMCG00006519 NA coding downstream 411233 7651790 ~ 7652194 (+)
AMCG00006521 NA coding downstream 520257 7760814 ~ 7782870 (+)
G110201 NA non-coding upstream 96427 7143267 ~ 7143659 (+)
G110167 NA non-coding upstream 302422 6937244 ~ 6937664 (+)
G110161 NA non-coding upstream 382088 6855880 ~ 6857998 (+)
G110147 NA non-coding upstream 444092 6795749 ~ 6795994 (+)
G110081 NA non-coding upstream 1020000 6218531 ~ 6220086 (+)
G110245 NA non-coding downstream 86473 7327030 ~ 7333170 (+)
G110243 NA non-coding downstream 352730 7593287 ~ 7633119 (+)
G110286 NA non-coding downstream 453997 7694554 ~ 7695513 (+)
G110361 NA non-coding downstream 673293 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 847480 8088037 ~ 8090127 (+)
G110163 LOC100846954 other upstream 327832 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 651687 6519865 ~ 6588399 (+)
G110023 NA other upstream 1257177 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2105371 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 2133064 5094271 ~ 5107022 (+)
G110279 NA other downstream 413115 7653672 ~ 7655194 (+)
G110445 NA other downstream 935203 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1470193 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 2323395 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4905188 12145745 ~ 12323278 (+)

Expression


Co-expression Network