G110243


Basic Information

Item Value
gene id G110243
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7593287 ~ 7633119 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138041
TGTCAGCCACAGTATGTTTAATTGAAGGTTTTCATGTTAATTACAGTGCCGGGTGGTCGATGGAGAGGTGGGCAGTGAAAGCAAGTCCGTCGTTTGGTGGCAAATACCCCCGTAGCTTATTCTCTGTGTGTAGGAGGTTTGTGGGGCAATCGGGTGTCCATCTTTTATATACAGATCTGGAACTCGTACAAATAAacctgctcacacacacacacaggaaaaaaaaaaatagtttcccCATATGCTGTCTTCCCTTTACAAAGGAGAACAATGCATAGTCCTTTATATATCATCTtccccttaaaaaaaacaattgagcTTCTTTCATCTCATTAAGTGTTCCTCAGTACTGCGATGGGGTTTTAATCCAAAGGTCTAAAGCATGAAcgatcagatttaaaaaaagaacaggcaaaaaaaaaaacaaaaaaaaaaagtaaagtatcAGTTTCCTTTAAAGCACCTTCAATAAAAAGCAATCTTTTTATCTAAAGCTGTCCAAATACATTCTTCTCCAACAAAATGCACTTTGGTCATTTTCAAACAGAccccccccactcacacacacacacacacacgtaacaAAAAGGCTTATTCGTAATGTCTCGACATTGAAATGtaacatgtttaaaaagtgCACATTTTCAGGCATGCCCGGCTTGTGTCGCGCGGGCCGCCCCGGTGtcttaataaatacagttaTATCTATCCTCTATCAAAATACCTTCAATCTTGGTAGCATTTACAATTATTGCTCTAAATACAGTTTGaccgtttaaaaaataaaagtcgGTTCTGACAGAGAAGGGCCAGATTGAAAGAGGGTGCAAGCGGCAATCGGACGGTGGTCCTATTGCGTGTTTTCTGCTGTTGTCATTTGGTTTTACTCCTTCTGTAGGTGCACAAATGGTTGTGTGCTCGGCGTGCGTGGCCAGCCTATGCAATTAAACCCTCCAGACTTGCTCAACAGGGTGGTTCTCGCTTCGCTCATGAAAAGGTTCGTTAGCTGTGGGGACTTGCGTTTGGAATTCCAGTCTTTGGTTTTGCGGTTGTCTCTTGCTTACTATAGGTGATATCAAGTATCTTCCAGCTATCTTACCACACAACGGAGCTTAAATCGTGACAGCGAAACCAACTGTCATCCTCTCTTCATCACAGTGTCCGTTCTGCTTCCCAAACCCTCGACAGACGTAGACCTCGGTGAGAGGGTCATTCACAGGCGTTCACAGCGGGCCGATACTGTACGTTTTCTGCAGCAGGATTTGTCTACCGTTAAAAGTGCGATAACCCTTTTTCAGTGAAGCTGCTGTGAGTTGCGGCTTGCACACCCTTCCCAAGAACAGCGCTAAAATAATACTTCCAATTAAAACAAGgtactaaaacaaatgccaaaaaaaaaaaaaaaaaaaagaaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138041 True 1418 lncRNA 0.42 2 7593287 7633119

Neighbor

gene id symbol gene type direction distance location
AMCG00006518 NA coding upstream 16014 7541813 ~ 7577273 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding upstream 103149 7484144 ~ 7490138 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding upstream 302618 7290004 ~ 7290669 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding upstream 358148 7226133 ~ 7235139 (+)
AMCG00006509 NA coding upstream 410184 7149305 ~ 7183103 (+)
AMCG00006519 NA coding downstream 18671 7651790 ~ 7652194 (+)
AMCG00006521 NA coding downstream 127695 7760814 ~ 7782870 (+)
AMCG00006525 LOC106596391,LOC107735413 coding downstream 174435 7807554 ~ 7812395 (+)
AMCG00006530 NA coding downstream 185553 7818672 ~ 7830030 (+)
AMCG00006528 NA coding downstream 213850 7846969 ~ 7858791 (+)
G110245 NA non-coding upstream 260117 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 352730 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 449628 7143267 ~ 7143659 (+)
G110167 NA non-coding upstream 655623 6937244 ~ 6937664 (+)
G110161 NA non-coding upstream 735289 6855880 ~ 6857998 (+)
G110286 NA non-coding downstream 61435 7694554 ~ 7695513 (+)
G110361 NA non-coding downstream 280731 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 454918 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 499976 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 540209 8173328 ~ 8175573 (+)
G110163 LOC100846954 other upstream 681033 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1004888 6519865 ~ 6588399 (+)
G110023 NA other upstream 1610378 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2458572 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 2486265 5094271 ~ 5107022 (+)
G110279 NA other downstream 20553 7653672 ~ 7655194 (+)
G110445 NA other downstream 542641 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1077631 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1930833 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4512626 12145745 ~ 12323278 (+)

Expression


Co-expression Network