G110279


Basic Information

Item Value
gene id G110279
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7653672 ~ 7655194 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138093
CCCTACTACCCAATATGATCACTTACAAATTGGAGACCTTTGTTGACAAAGctaaaacagtttaataattTAGACATgtaagaaacttttttttcttttttacattccATCCGTTTCATTTGTTTACACTTTCTTGGGCACAGCTGGTAGGGCGACACAAACGACTGGTCCTAGAGCGGCTGGAGACTGAAACAcctgtatacgtgtgtgtgtgtgtgggaagcATCTACACTACGGCACCTGCATTTAAAGGTACCGGACCATTGCACTCACCTTCGTCTGACACTTGACAACCACTCCGACAAACGAGTGTCTGAACAGTTTGGAAATCAAGAATCAACGAGTCCACCGATTAAAGATCAGCGTTCAGGGCATCTGCACGGCAGCACTGCCAACTCAAAATGTCCGAGAAGAGTCATGTTGCCACTGGAATGACATTTAGGGCTTTTTCTGAAACCCCgcaaatatttaattcattgaTACAGAggacacttttttgttttccccccacaGGTTTTACATTTGACTACCCTTGACAGTTAGgcttgtgtggctgcagctccACATTCAATCACATTAAGCTCTTCTCGCTGGAgactgaatgaaaaacaaaggcCAGAGAACGCCGGTCGAGGTCTAgtccttcacacacacatctcccGACTCTCGCCGACACAACAGGCCTTCGCCGAGATCAGTCAAGGATAACCCACGCGTGTCGAGAGCAGCCCTTCCTTCACTCTGGGCATCTTGGAGGTGATGAAAGCGCAGCCCTGTAACCATTCGCGAATCCTGCAAACACGTCAACCGTAGGAGGGCAGTGCTGCTGTACACAGGGCGAAAGACAGACAACAGTACATTAaccccgtttttttttttttttttttttaggatttaATGTACGGATCTCAAACTGCTCTTTAAAAAGTGTATGCAGAGAGTTTCTAGGAGCCCCAAACCCGATCCTCTCCAGGCCGCAGGTGTCAGATGCCATCGCTCCGCTGCGTTTCCACACTTCTGTAAATCAATACGTTTCCAGCGATACTGGCAGAAAAGGCCCCGGCGGATGGCAATTGCCCCAAATGAGCGGCTCATAGAAGCGGCCTCGTATCAGCCTGGCTTGTATACCTCCTGGCCGAGTATGTCCTTCACAAGAGACATGCACAGCGGGCAGGATTGTGCGCACGCGCCACACAGCTACAGACGGCCTGGACTTCTAAGATCTCTACAATACAATGACGAGGGACCAGAGCCTGCATTCAGAGGTTTGGAAGCCGATGTTTAGAAAGCACAgcgctctctctttcttccttccttttaaaaaaaaaaattgggcgAATCTGCCTTGTATCAAAATACTATCAGCCAgtataaaagataaataaattaaaacgcCTCGTGACTTTGGAACGGCACCCTCGTTGTACACGTAACATTCAGCACACTTGTTTCTAAAACAAGACCAGGTATCGAGACCCGTCCGTAGATGTGATGCTCCTATACCGACTCAATCACGAGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138093 True 1523 TUCP 0.47 1 7653672 7655194

Neighbor

gene id symbol gene type direction distance location
AMCG00006519 NA coding upstream 1478 7651790 ~ 7652194 (+)
AMCG00006518 NA coding upstream 76399 7541813 ~ 7577273 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding upstream 163534 7484144 ~ 7490138 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding upstream 363003 7290004 ~ 7290669 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding upstream 418533 7226133 ~ 7235139 (+)
AMCG00006521 NA coding downstream 105620 7760814 ~ 7782870 (+)
AMCG00006525 LOC106596391,LOC107735413 coding downstream 152360 7807554 ~ 7812395 (+)
AMCG00006530 NA coding downstream 163478 7818672 ~ 7830030 (+)
AMCG00006528 NA coding downstream 191775 7846969 ~ 7858791 (+)
AMCG00006532 NA coding downstream 217880 7873074 ~ 7877171 (+)
G110243 NA non-coding upstream 20553 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 320502 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 413115 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 510013 7143267 ~ 7143659 (+)
G110167 NA non-coding upstream 716008 6937244 ~ 6937664 (+)
G110286 NA non-coding downstream 39360 7694554 ~ 7695513 (+)
G110361 NA non-coding downstream 258656 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 432843 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 477901 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 518134 8173328 ~ 8175573 (+)
G110163 LOC100846954 other upstream 741418 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1065273 6519865 ~ 6588399 (+)
G110023 NA other upstream 1670763 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2518957 5127357 ~ 5134715 (+)
AMCG00006460 wasl,wasla,LOC107698525 other upstream 2546650 5094271 ~ 5107022 (+)
G110445 NA other downstream 520566 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1055556 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1908758 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4490551 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4964868 12620062 ~ 12651815 (+)

Expression


Co-expression Network