G110286


Basic Information

Item Value
gene id G110286
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7694554 ~ 7695513 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138100
GTTTTACTGATAGgtcaatagattttttttgtaacatacAAACAGGTCCGTTTCAgaagattttttctttctttttaaagatcCCAGACGTACGACCACAGTGCTGTGACAGTACTACCAACAGAGGCGCAGACTTTCTGAAGGCACTGACAGGCTCCAAAGGCTAGGGATGCACCAGAGCATGGCTGATTAACAGAACCGCATATCATATAAAAATAACCTTttgaatacaatttacaaaatgtattattacaATCTTCTGTTAATAAGAATATTTAACGACAGTAAATGTCAAATTATTTACCTACTTGCcctgtacatttataaaacaatgcatatatatgtagtaGTCCACTGTGCCTATTAATAAATGTCTTACTGTATCGTAATAACACAAGTCTAAAAGTACTGTAACAGAGTAagaaaagttttatttatttttgcaataaaaaaaaacatttgtaatttttttttttttttttttaacaaaatgaataagGCAGGTTAATGGTCCCAGCGAAGAGAAGAGTTTAGCACCAGAATACAAACCCCTGGAAAACAGTAGATGTACAATAGGCCGTGTACCTTTGCATGATCGAGATCTGCATTGCTCGAGATTGTGTTAGTACAAGGAGGAGGCTGTGTCTGAAGAGTGTGGGATACATTGTCTGTTCTTCAATATACGGTGGCACTTGAAGGAAACGAACAGGACTGCAGGAAACGTCTCCGGTGAGGGCTGTCCATCATGTCCACTCTGTGGGGGGGTCCCTCGGGCCTCTGGGTTTTGTACAGCGGGTACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138100 True 803 lncRNA 0.38 2 7694554 7695513

Neighbor

gene id symbol gene type direction distance location
AMCG00006519 NA coding upstream 42360 7651790 ~ 7652194 (+)
AMCG00006518 NA coding upstream 117281 7541813 ~ 7577273 (+)
AMCG00006517 magi2,magi2a,LOC107694149,LOC107755877 coding upstream 204416 7484144 ~ 7490138 (+)
AMCG00006516 magi2,LOC107554949,LOC107574163,LOC107753655,LOC107661469 coding upstream 403885 7290004 ~ 7290669 (+)
AMCG00006515 gnai1,LOC107386448,LOC108279833,LOC107590838,LOC100706147 coding upstream 459415 7226133 ~ 7235139 (+)
AMCG00006521 NA coding downstream 65301 7760814 ~ 7782870 (+)
AMCG00006525 LOC106596391,LOC107735413 coding downstream 112041 7807554 ~ 7812395 (+)
AMCG00006530 NA coding downstream 123159 7818672 ~ 7830030 (+)
AMCG00006528 NA coding downstream 151456 7846969 ~ 7858791 (+)
AMCG00006532 NA coding downstream 177561 7873074 ~ 7877171 (+)
G110243 NA non-coding upstream 61435 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 361384 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 453997 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 550895 7143267 ~ 7143659 (+)
G110167 NA non-coding upstream 756890 6937244 ~ 6937664 (+)
G110361 NA non-coding downstream 218337 7913850 ~ 7914828 (+)
G110429 NA non-coding downstream 392524 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 437582 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 477815 8173328 ~ 8175573 (+)
G110446 NA non-coding downstream 483008 8178521 ~ 8178728 (+)
G110279 NA other upstream 39360 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 782300 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1106155 6519865 ~ 6588399 (+)
G110023 NA other upstream 1711645 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2559839 5127357 ~ 5134715 (+)
G110445 NA other downstream 480247 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 1015237 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1868439 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4450232 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4924549 12620062 ~ 12651815 (+)

Expression


Co-expression Network