G110361


Basic Information

Item Value
gene id G110361
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 7913850 ~ 7914828 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138195
CTGGAGCAGAAACTGAAAACTAGTTCCACCGAATGGCTCTACGGTAGTCATCTGTCCACAGAGAGGGAACCGGACGTGTCCTAGCATCTGTCAGCAGCCTCGGAGAGTTCATTGCCATTTGTAACCGAATCGGCGCTGATTTTCTGAAGAGTGGCCAATGGAGGGGCTTTGGCTCCAACAGAGTCGATGAAGTTGACGGGGGTGAAGTCCAGCACAATGGAGTGGACGTCCGTCAGGGGCTCCAGGAAGTGCCGTGTTTCCTCGCTGTCCAAGTCGCTCTTGGCCGCCGGGAGCTGGCCGTTGCTCTGGAGCTCCATGCTCTTCCCATCCTCCAGCTCGTGTGTCACCCCCATCTCTGCGTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138195 True 365 lncRNA 0.57 2 7913850 7914828

Neighbor

gene id symbol gene type direction distance location
AMCG00006535 psmc2 coding upstream 2488 7907694 ~ 7911362 (+)
AMCG00006534 pmpcb,LOC106576546 coding upstream 13859 7896187 ~ 7899991 (+)
AMCG00006532 NA coding upstream 36679 7873074 ~ 7877171 (+)
AMCG00006528 NA coding upstream 55059 7846969 ~ 7858791 (+)
AMCG00006530 NA coding upstream 83820 7818672 ~ 7830030 (+)
AMCG00006531 NA coding downstream 21555 7936383 ~ 7950980 (+)
AMCG00006529 smo,LOC106609777,LOC104956154 coding downstream 40198 7955026 ~ 7966534 (+)
AMCG00006533 NA coding downstream 53163 7967991 ~ 7981094 (+)
AMCG00006539 NA coding downstream 79103 7993931 ~ 8000522 (+)
AMCG00006540 ube2h,LOC105888480,LOC107676921 coding downstream 111862 8026690 ~ 8034832 (+)
G110286 NA non-coding upstream 218337 7694554 ~ 7695513 (+)
G110243 NA non-coding upstream 280731 7593287 ~ 7633119 (+)
G110245 NA non-coding upstream 580680 7327030 ~ 7333170 (+)
G110240 NA non-coding upstream 673293 7240086 ~ 7240557 (+)
G110201 NA non-coding upstream 770191 7143267 ~ 7143659 (+)
G110429 NA non-coding downstream 173209 8088037 ~ 8090127 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding downstream 218267 8133095 ~ 8135492 (+)
G110444 NA non-coding downstream 258500 8173328 ~ 8175573 (+)
G110446 NA non-coding downstream 263693 8178521 ~ 8178728 (+)
G110447 NA non-coding downstream 264613 8179441 ~ 8179688 (+)
G110279 NA other upstream 258656 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 1001596 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1325451 6519865 ~ 6588399 (+)
G110023 NA other upstream 1930941 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 2779135 5127357 ~ 5134715 (+)
G110445 NA other downstream 260932 8175760 ~ 8176786 (+)
AMCG00006552 NA other downstream 795922 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1649124 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 4230917 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4705234 12620062 ~ 12651815 (+)

Expression


Co-expression Network