XLOC_000006 (f7l)


Basic Information

Item Value
gene id XLOC_000006
gene name f7l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 109798 ~ 119146 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000018
ACTTCAATCCAGGAGTGAAACCCTGCTGGAGATCGAGCCGAGCAGAATGAAGCTGTTCTGGGGACAAACCCTGATCCAGATCCTGATCGTGACGCTGGTCTGCGGGTCAGTGTGTGCTGGACGGCCCTCAGTGTTCTTGAGTCGTGCAGAGGCGAACCGGCCGCTGCATCCGCGTGTGCGCAGGGCGAACTCTTTCCTGGAGGAGCTGAAGCTGGGAGATCTGGAGCGCGAGTGTCTGGAGGAGATCTGCTCATATGAGGAGGCCAGAGAGATCTTCACCGTCCCCGACCAGCTGGAGGACTTCTGGAAGAGGTACACAGAGGTGGATCACTGTCAGTCCGAGCCGTGTCAGAACGGCGCCACGTGTGTGGACCAGATCAACACATACATCTGCATCTGTCCAGTCAACCTCGAAGGGCGACACTGCGACAAAGAAATCTCCCCGCGCTCTTCATTCGGATGTCTGTACAGGAATGGTGGCTGCGAGCACTTCTGTGTGGAAACCAGCGAGACCACTCACAGCTGCGACTGTGCGCCCGGATACACACTACACAGCGACAACAGCAGCTGCGTGCCCACGGCTGATTTCTCGTGTGGCCGGCCGGTGGCGAAGGGTGTGGGTCCGAGGATAGTGAAGGGGGACGTGTGTCCCAAAGGCCAGTGCCCATGGCAGGCTCTACTGGAGTATGACGGACAGTATAAATGCGGCGGTGTGATCCTGAACTCGCAGTGGATCATCACCGCCGCTCACTGCATCTGGAGGAAAGATCCAGCGCTCTTACAAGTCATAGTTGGTGAGCACATCCGCGATAGAGACGAAGGCACGGAGCAGATGAGGAAGGTGTCAGAAGTCTTCCTCCACCCTCAGTATAATCACTCCAGCACAGACAGCGATGTGGCTCTGCTGCGTCTGCACCGGCCCGTGACTCTCGGACCCTACGCCCTGCCCGTCTGCCTGCCTCCGCCCAACGGCACCTTCAGCCGCACACTGGCCTCCATCCGCATGTCTACGGTGAGCGGCTGGGGCCGGCTGGCGCAGTCTGGACCTCCGTCTACTGTGCTGCAGCGGCTGCAGGTGCCGCGGGTCTCCTCTGAGGACTGCAGGGCTCGATCCGGCCTGACCGTCAGCAGGAACATGCTGTGCGCCGGCTTTGCCGAGGGAGGGCGCGACTCCTGCCAGGGCGACAGTGGTGGTCCGCTGGTCACGCGCTACAGAAACACCTGGTTTCTGACCGGCATCGTCAGCTGGGGGAAAGGCTGCGCTCGCGCAGACGTCTACGGCATTTACACACGTGTGTCTGTGTTCGTGGAGTGGATCTTGAAGACTGTGGCCAGCGCATGAACATAACCACGATCACGCTTACTGCTCAGAGTGATCTGTACAGCGCTCTCACTATAATTACTGCTCCACAGATGAAGATGCTCATTATCATGCTACAGTACGATCGCCACCATATCACAATACTCTTCCTATTtctatatgtataaaatatgcatCATATGCAGTAATTCCTGTTATAAATGATGTATCTGTACACTTACATTAATTTGCCCTCATAAACTCTGATCAAAGTTTTGAACACATTAAATTCCTtaagggctatcagtcatttagggcgggtctattaattgtttagggaggggctatcagtcctttagggcggggcttttAGTTCTTTGGAGAGAGGCTTTTAGTGATAAAAAGTGGGATACCAGTCCTTTTGGGAGGGGCTATCAgtttaaggcggggctattagtcctttggGGAGGGGCTTTCAGTGATTTAGGGCAGGAATATctgctttagggcggggctttcagtactttggggaggggctatcagtgcttcagggcagggctattagtcctttagggagtGGCTTTCAGTGATTTAAGGCGGGAATATCAGTGcgttagggcggagctattagtcctttgaggaagggctatcagtgctttagggcggggctattagtcctttgcTGAGTGGCTTTCAGtgatttagggtggggttattagTCCTTTGGGGAGTGGCtttcagtgctttagggcggagctatcactTCCGTTGTTAGCAACTGCCATCTTTCAACAATCCAATCAGTTCTCAAAGAACAAAATCGTGCACTTCCTTACAGACAATCTTGACTTCTGTCTCTTTAACTTGCAATCACGTAGTATATAGTGTCCATCCCAAATGATGATGTCTGTGTATAATAAATGTTCACTGAAGTGTACTTGTATGAAAATTGTGTTGTCCTCGTAGGGtgggcatcatctcttcacaggtcttggatctgaTCGTGTGGCACTGCACAATCTCTAATTCACTAATAACAGTAAATTGTTTTTGCAACACACAGTGAAGAACTACCCTGGAAAGATGTGACTGTTCTATCTGATCATATTAAATATGGATGTGTTCATTGATGATGCAATGTTCAAATATTAGAAAATAGAGCACACCTGAGCAGACTGGCTGTATCAGCACCTCAGGTGTGTGTCTTATTCTAATAATTCAGGCCATTATTCTGCTTATGCCACTGTTGAGTTTGAGTTTTTGCTCCTGTGTGCAGCACTAGTCTCCTCCTCCTGTTGTGGTGTGGTTTCTGACtgctgtagctgtgaaataactctaatcattcagcggagtgatatggagctgtaacacgctctaaacctgccggaactactttatctgacaataaccaaacacctgagaGTGACCAATGGCCAATCAGAATGCAGAACTCAGCATTTGTAGGCGGATCCTTATAATATGCAAATATTATGAAATGAATCCTTGATTGACAATCAGATTTCTGTGCACTACAGCAATAAAACTAAAGTGACAGACACCAACTGAGaaa

Function

symbol description
f7l Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to act upstream of or within blood coagulation and proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including acute pancreatitis; artery disease (multiple); diabetes mellitus (multiple); factor VII deficiency; and obesity. Orthologous to human F7 (coagulation factor VII).

GO:

id name namespace
GO:0007596 blood coagulation biological_process
GO:0006508 proteolysis biological_process
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-102 Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to act upstream of or within blood coagulation and proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including acute pancreatitis; artery disease (multiple); diabetes mellitus (multiple); factor VII deficiency; and obesity. Orthologous to human F7 (coagulation factor VII).

Ensembl:

ensembl_id ENSDARG00000100782

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000018 True 2870 mRNA 0.51 8 109798 119146

Neighbor

gene id symbol gene type direction distance location
XLOC_000005 hikeshi coding upstream 70607 36552 ~ 39191 (+)
XLOC_000004 eed coding upstream 75468 27690 ~ 34330 (+)
XLOC_000003 CU651657.1 coding upstream 82543 25585 ~ 27255 (+)
XLOC_000002 nfkbiz coding upstream 86409 18716 ~ 23389 (+)
XLOC_000001 cep97 coding upstream 93425 11822 ~ 16373 (+)
XLOC_000007 f7 coding downstream 814 119960 ~ 125246 (+)
XLOC_000008 f7i coding downstream 8104 127250 ~ 134079 (+)
XLOC_000009 f10 coding downstream 16757 135903 ~ 142469 (+)
XLOC_000010 prozb coding downstream 25138 144284 ~ 151998 (+)
XLOC_000011 NA coding downstream 37646 156792 ~ 157282 (+)
XLOC_000018 NA non-coding downstream 236335 355481 ~ 358562 (+)
XLOC_000024 dre-mir-155 non-coding downstream 457298 576444 ~ 576521 (+)
XLOC_000026 NA non-coding downstream 675830 794976 ~ 911551 (+)
XLOC_000028 NA non-coding downstream 896666 1015812 ~ 1033638 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06299968_06305021 NA coding CI01000299 null 6298896 ~ 6305158 (-)