G110445


Basic Information

Item Value
gene id G110445
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 8175760 ~ 8176786 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138304
GCCGGCAGGATGCTGCttaaagaacaacaaaacattactgaagaaaaaagaagggAACACACACGTCCGTACCTTTGGCAGATTGTAGATGTGGCCCTGGTAGATGAGCTGGTAGTGGGGGGGGTTAGTGCTGCTCTGATGGATACAGAACAGGTTCTCATTGGTCATGTCTGCAACacgcaagaaaataaaaatcagaccCACGCGAAATCAGCAGCTGTGCAGAAGGCAGAAACGAGCGCTCAGACTCGGCACCAACGCTACCTGGCTTGTCCGGCGTCTGGATGAAGTGCTGGGAGGTGAATGTCTTCCCATCCGGGTATTTGGGATGCGGAGGGAGCCGGGAGTCCAGGTATGTGCAGAAAACATGCATGATGATCTGGAAGGGGAACACACGGCAATAACAATGGGACTAGCATCGCACGACACGTGTCACCGACCAGAGAGACGACTGTGGCTTCTCCGGGACACTCGAGACGGGAAGCCGCGGGAGACGTGATTGACTCACCGCCGAGTCCGTGGGCAGGTCGGTGTCCCACTTCCTGGCCTTGATGTCGCCGCCGCTGTTCCACCGGAAGGAGCTCATGCAGCCCCCGTGCGCCAGCTCTGCGGGAGAGAGGGGTCAGTCTGGGCCACGGACACCGGCTGCAACTATTTATAGTGCCGTCGTCGGACTCACTGAGCCAATGCGTTTCGTGACGCTTCCCCCTCACCTTTGATCCGCTCCACCAGGTACTCTTGGTTGGGGGTGATGTCCAGGTACTGAACAATGGCGTTCAGGGTGGGAATTAAGGAGGCCTTCACTAGAGCTGCTTGCTTCAGGCTGCTGATACTGGCTTCTGtcagcaacacaaacaaaatcggGGGGTGGGAAATTAGACAGGGCTGTGAAAGAAGATCTTAAAACATCTACAGAGCGACCAGAGCCTCCTTTTAATTACCCCCCGTCTGCAGCTCCGGGCAGCCCATCCTCCTGAGCAGGGTGTTCACGGAGTCGATCTCCTTCACCAGGGGAACCAGGATGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138304 True 1027 TUCP 0.56 1 8175760 8176786

Neighbor

gene id symbol gene type direction distance location
AMCG00006540 ube2h,LOC105888480,LOC107676921 coding upstream 140928 8026690 ~ 8034832 (+)
AMCG00006539 NA coding upstream 175238 7993931 ~ 8000522 (+)
AMCG00006533 NA coding upstream 194666 7967991 ~ 7981094 (+)
AMCG00006529 smo,LOC106609777,LOC104956154 coding upstream 209226 7955026 ~ 7966534 (+)
AMCG00006531 NA coding upstream 224780 7936383 ~ 7950980 (+)
AMCG00006546 NA coding downstream 46095 8222881 ~ 8244037 (+)
AMCG00006551 NA coding downstream 467456 8644242 ~ 8660293 (+)
AMCG00006558 gpr85,LOC106576049 coding downstream 550857 8727643 ~ 8728326 (+)
AMCG00006556 bmt2 coding downstream 569808 8746594 ~ 8794059 (+)
AMCG00006555 NA coding downstream 622956 8799742 ~ 8807859 (+)
G110444 NA non-coding upstream 187 8173328 ~ 8175573 (+)
G110439 ahcyl2,LOC102228098,LOC105933830,LOC106941354,LOC103156365 non-coding upstream 40268 8133095 ~ 8135492 (+)
G110429 NA non-coding upstream 85633 8088037 ~ 8090127 (+)
G110361 NA non-coding upstream 260932 7913850 ~ 7914828 (+)
G110286 NA non-coding upstream 480247 7694554 ~ 7695513 (+)
G110446 NA non-coding downstream 1735 8178521 ~ 8178728 (+)
G110447 NA non-coding downstream 2655 8179441 ~ 8179688 (+)
G110523 NA non-coding downstream 618274 8795060 ~ 8795331 (+)
G110558 NA non-coding downstream 710900 8887686 ~ 8888492 (+)
G110590 NA non-coding downstream 1279879 9456665 ~ 9456911 (+)
G110279 NA other upstream 520566 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 1263506 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 1587361 6519865 ~ 6588399 (+)
G110023 NA other upstream 2192851 5979062 ~ 5982909 (+)
AMCG00006459 NA other upstream 3041045 5127357 ~ 5134715 (+)
AMCG00006552 NA other downstream 533964 8710750 ~ 8724066 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 1387166 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 3968959 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 4443276 12620062 ~ 12651815 (+)
G111197 NA other downstream 4834398 13011184 ~ 13043448 (+)

Expression


Co-expression Network