G110507


Basic Information

Item Value
gene id G110507
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 8722388 ~ 8724352 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138386
TTTCACAATATACTGGGACACACACATTGATGGGAAcctttaatgttttcataactTATGGTACTACTTGGGGAATGTGAACTATTCTATGGGTAACCTTCTCTCTAACTTAGCTAAATACTGTTTGAAAGATCAGAATTTCAAGTTTTTCAAAAGAAGGGtaaatgcaaaaggaaaaaaagaaactgctttCAGTAAACGACTAGGCTCTATTTAAAAAGTAGTTTCATAGCTTCATAGTCAGATCTGTTTACACAGATTTACACAATTGCACATGGCTTTTAATAATTGCAAGAGATTAAGTTTATTATATTagcaaaaagggaaataaaaaccaCAAACTTGGCATAAagtaatatatgtaattttgGTGTGTAATTGATATagatgcatatatttatattaaagtacTGTCAAAGGATATTAAAGGCAACACAGCAGAAAGTATGGCTATACAATTCCTCACAAACCTACATTTCAGAGACTCAGGTTTTATACAATTTGGCATTGATAATAGATTTTAATAATGATCAATGAACATTATGGAAAcagtaaagaaaagtaaatgattTAACCATTACAACAGTGAAGAAGGCAATGCACGGTTTTCTTAGACCAGTGTTATCTACtataaaaaaagtacaaataataagaCTATAAATGAGACATTTCAGTTATTGTTGCCTGTCCTTAGTAACCTGAATATAACAGAATGATgttgaataatgttttaatacagtgGTCCTACTTTCATTCTCCAAttcatttaagaaaactaaGTGCAGTGCAATACAGTGAGACAAACAGCAGTAACAAAAAGTTCATACTCGTGTATTAATCTGACAGATACAAGGTTACCAGATTTTACAGAGCATTTATGAATTCACAGACGACATAAGATTGGATAAGGTTGCAACCATATGCACGTAAATACCTGTAAACCGGTATCATCTACCATGAAGTTCAAAACCTGCCCTGGACTTAATCTCGATTCAAAACCTGTGTATCTGGTGACACGTTTCTGGATCTCGCTTCTCTGAAAAGGGGGCATGCATGACGCAAAACAGGGGGGTGGTAATACGTATAGACACGtttcgttattattattactttaaatcAAAGCGTACAGTTGGCCAGTGGTTCTCTTTACTAAGAAATGAAAGTACATCCCCCGGAGTGTTACTAGTGGGGCGAACAAAAGAGGAAGCAACCAGGACAGGAAGAAGAGCAGTCAAACTGGCACATTAAAGCAACCAGCCTTCAATTGTAACTCGTTAGGACTGAACTGCAAAAGGGCACACAATGCAATGTCCAAAGTGGCAAAAATCAAAAAGCGGGAGAAGACCGAGTTTCTCATCCTCTTGTGCTGCAATCGTGTGTCCCTCGTCCACCTCCAGGGCATCAGTCCACTCGTTATCCCCTCTTCTTCCCCGGTGTTGTTGACTGATCGGCCATCACTGCCCCTCTTCCCTGTGCAGGAGGTGCCGCTGCCCAGCCGAGCGGGAGAGGGAGGATTGAAACAGCGCTTTGTCGGGAGATATCTGTCCTTTTTTTCAGTGCAAATACAATTAGGGTTTGAACTGTCGTGGACCACAGCGTCCGTATCAGCCCCACCGCGGCCAGGGGGAATAATGGACCACATGTTTCATATCCGTTTGCAGGCCCGCTGCCGGACAGGTGCGCCCCCCGCCCCGGCTCTCACAGCTGCCCGCTTCTCCTCCGGGAGTACCAGCCCAGGCAAGCGCACAGGCCCACGATGGTGACGGTCACCCCCAGGAGCAGAGCCACGGCGTCCCCCCCGTCAAAAGCCTCGGCGCCCGGCAGAGAGGCGAGTAACAAGAGAGCTGCAAACACGGCAGGGACGGCTGAGCCGGGAGCCATGATGTGCTGCGAGTGGGTCAGATGACCCGCGTCACCGTGGTCACATGATGAGGGCGCACTTCCTGTTTGACGTCAgactttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138386 True 1965 TUCP 0.43 1 8722388 8724352

Neighbor

gene id symbol gene type direction distance location
AMCG00006550 foxp2 coding downstream 209766 8477343 ~ 8512622 (-)
AMCG00006549 mdfic,si:ch211-262n1.4,LOC107656347,LOC107658868,LOC107584008 coding downstream 297790 8419388 ~ 8424598 (-)
AMCG00006547 tmem209,LOC102778061 coding downstream 538834 8174241 ~ 8183554 (-)
AMCG00006548 NA coding downstream 552997 8169002 ~ 8169391 (-)
AMCG00006545 LOC107725924,LOC107658882,LOC107583963,LOC107656398,LOC103371314 coding downstream 585177 8128879 ~ 8137211 (-)
AMCG00006553 NA coding upstream 127391 8851743 ~ 8856674 (-)
AMCG00006554 NA coding upstream 133993 8858345 ~ 8869522 (-)
AMCG00006559 LOC102797044,LOC102787037 coding upstream 163339 8887691 ~ 8912003 (-)
AMCG00006562 LOC105007066,LOC106576072,LOC106609221 coding upstream 471084 9195436 ~ 9197467 (-)
AMCG00006571 dnm1l,LOC107716704,LOC106561645 coding upstream 847137 9571489 ~ 9587506 (-)
G110369 psmc2 non-coding downstream 813160 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 965536 7756625 ~ 7756852 (-)
G110271 NA non-coding downstream 1154229 7567888 ~ 7568159 (-)
G110270 NA non-coding downstream 1154821 7567204 ~ 7567567 (-)
G110269 magi2 non-coding downstream 1163920 7558205 ~ 7558468 (-)
G110576 NA non-coding upstream 285788 9010140 ~ 9014326 (-)
G110594 NA non-coding upstream 752130 9476482 ~ 9477506 (-)
G110720 NA non-coding upstream 1580579 10304931 ~ 10305247 (-)
G110733 LOC103376870 non-coding upstream 1697209 10421561 ~ 10470060 (-)
G110757 LOC103376870 non-coding upstream 1878743 10603095 ~ 10603733 (-)
G110195 NA other downstream 1615250 7078389 ~ 7107138 (-)
G110140 NA other downstream 1936537 6785313 ~ 6785851 (-)
AMCG00006491 NA other downstream 2679464 6014104 ~ 6042924 (-)
AMCG00006476 NA other downstream 3118655 5577470 ~ 5603733 (-)
AMCG00006429 NA other downstream 4445233 4270416 ~ 4277155 (-)
G110520 bmt2 other upstream 59553 8783905 ~ 8794062 (-)
G110570 LOC106576073 other upstream 273285 8997637 ~ 8999264 (-)
G110605 NA other upstream 821143 9545495 ~ 9560104 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other upstream 1362923 10087275 ~ 10107285 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 3293517 12017869 ~ 12024549 (-)

Expression


Co-expression Network