G110590


Basic Information

Item Value
gene id G110590
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 9456665 ~ 9456911 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138486
AAAcaaagtacttttaaaaatgaatttaaaaatacatttacagtgcgcACTACGGCGGGGTTGATGGCATTtgcgttttgtgttatttcattccaggctttatttttgtcagcatttccACCCAAATGTACCCGTTTTCTTATGATTAGTTGCTGAACTATCGCAAATTTTTCATCTTcggtgaaatttgtattttttactttacaagcagccattttgttttttccattcttcacaaaaataataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138486 True 247 lncRNA 0.32 1 9456665 9456911

Neighbor

gene id symbol gene type direction distance location
AMCG00006560 NA coding upstream 397302 9036471 ~ 9059363 (+)
AMCG00006561 dock4,LOC106609220 coding upstream 447425 8912280 ~ 9009240 (+)
AMCG00006557 NA coding upstream 571070 8874473 ~ 8885595 (+)
AMCG00006555 NA coding upstream 648806 8799742 ~ 8807859 (+)
AMCG00006556 bmt2 coding upstream 662606 8746594 ~ 8794059 (+)
AMCG00006566 NA coding downstream 17889 9474800 ~ 9476828 (+)
AMCG00006563 bpgm coding downstream 22592 9479503 ~ 9484141 (+)
AMCG00006564 NA coding downstream 73322 9530233 ~ 9560060 (+)
AMCG00006568 NA coding downstream 135481 9592392 ~ 9595123 (+)
AMCG00006569 NA coding downstream 175872 9632783 ~ 9642065 (+)
G110558 NA non-coding upstream 568173 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 661334 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 1276977 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 1277937 8178521 ~ 8178728 (+)
G110444 NA non-coding upstream 1281092 8173328 ~ 8175573 (+)
G110681 NA non-coding downstream 573515 10030426 ~ 10031846 (+)
G110722 NA non-coding downstream 912804 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 1663479 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 1892973 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 2214658 11671569 ~ 11672448 (+)
AMCG00006552 NA other upstream 732599 8710750 ~ 8724066 (+)
G110445 NA other upstream 1279879 8175760 ~ 8176786 (+)
G110279 NA other upstream 1801471 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 2544411 6911876 ~ 6912254 (+)
AMCG00006501 fam19a5,LOC107552289,LOC106561036,LOC107721159,LOC103356475 other upstream 2868266 6519865 ~ 6588399 (+)
AMCG00006565 LOC103366858,LOC103380581 other downstream 107041 9563952 ~ 9568276 (+)
AMCG00006624 NA other downstream 2688834 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 3163151 12620062 ~ 12651815 (+)
G111197 NA other downstream 3554273 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 4476755 13933666 ~ 13939475 (+)

Expression


Co-expression Network