G110681


Basic Information

Item Value
gene id G110681
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10030426 ~ 10031846 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138618
CATTGTTCTAACCTTACTAGGTGTTAACTGTCATCTTACCAATTCAATACAACATTGAACAGACAATGCTTAAAATAAGATTGCAAGAGCAAATCAGaatgaagaaaacatacaaagaggctttttattcaatacaagaaataaatagaGCAGGGAATGGATTATGGAGCCCACACACTGACCAGGAAATCATTGGCTGGATGATGCTCTCCTATTCCCTGGCACAGTTCTGCAACAGGGGGCTTAGTGTGTAACTTTCTGTGGAGATCTGCCATAGTGTGAGCTACAAAATTGCCCTAGggttgctgtgtttttgtatgtcaGTGAGAGTTTTATTGCACGGCTTGATTGTCTCAATAAAGCCCCTTTCTGAAGTCAGTCCAAGATCCACAGCTTTTTCTGGGATGGGCATCTCAGTCTGTCACTGAATATGTGCCTCGTACTGAGTCAGTGAAGAattaagccccattcacacagaaacgtTTGCAGCCTTttttgtggcattttgttgACAGAAAGGTTGGGGTGAAACAGTCGAAGATGATATTTCAACACCAGGAACTTTCCACCAGCAGCaacgggtctgtgtgaatggagcaggataGGAATGACAGCATAAGACTCATCACGTCCTTGCATTCTTATAACTGgcataaccaatcagaataggggtgagtttttcttatttattttagttgatttcactttgctgcagtatatgtcaagaccccacacaatgcctcttgTTACGCTACCATGAAGCGAGAGCTGAGTTGAACTGGGTTCACTGATTCAAATGACCTGAGAttgctgggtccagtgaccacactgtaaaaacacacaaccatacaacctgatGACCTGGTCATAGCGCAAAAATTCACCTAGATTGACGTATCCTGACAATTTGTTCTTCATTCTATTTGTTCCGAACTGAACCGGCACTCTGGTTAGGACCAATAGCACAGTAACCACagtggaaggaaactggcaaaatgtGGAAATTATCAAACTATtacaaacacatccagaatATCAGTCCATGTCTACTCTCCCGAATCCACATGCTTCTATTGCATGTCGTTCCTAAGGCTACAATGCTCTTTTCGGCATTCTCTTGAATGGGTACCTCCCAACATTTTGCCAGCATTCAaagtcagtgtgaatgggggtgcaataggaaaaaaactggaaaatgctGCCTGCTTTTTGCTTGAATTTGAGTGTGAAAGGGACTTCTGATACTAGATGGTGCAAAGTATTCCAGGACAGTGTGAATCCACGTCTCAGAGGTTAATAAGAAGTGGTCCAGGTTAGATCAAACAGGACTGAGTAGACTTGTGCTGTCTGAGTACCTTCCCCCgaccctggaaaaaaaaagagaaaagtaaaagaatttaaaacataatctgAAAGCCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138618 True 1421 lncRNA 0.42 1 10030426 10031846

Neighbor

gene id symbol gene type direction distance location
AMCG00006577 NA coding upstream 46199 9968172 ~ 9984227 (+)
AMCG00006576 NA coding upstream 178098 9850650 ~ 9852328 (+)
AMCG00006574 NA coding upstream 190562 9806029 ~ 9839864 (+)
AMCG00006575 NA coding upstream 278531 9721539 ~ 9751895 (+)
AMCG00006567 NA coding upstream 373810 9653307 ~ 9656616 (+)
AMCG00006581 NA coding downstream 128147 10159993 ~ 10179843 (+)
AMCG00006590 NA coding downstream 480326 10512172 ~ 10518858 (+)
AMCG00006589 NA coding downstream 561451 10593297 ~ 10617772 (+)
AMCG00006596 NA coding downstream 729322 10761168 ~ 10763850 (+)
AMCG00006595 NA coding downstream 754414 10786260 ~ 10818604 (+)
G110590 NA non-coding upstream 573515 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 1141934 8887686 ~ 8888492 (+)
G110523 NA non-coding upstream 1235095 8795060 ~ 8795331 (+)
G110447 NA non-coding upstream 1850738 8179441 ~ 8179688 (+)
G110446 NA non-coding upstream 1851698 8178521 ~ 8178728 (+)
G110722 NA non-coding downstream 337869 10369715 ~ 10369931 (+)
G110849 NA non-coding downstream 1088544 11120390 ~ 11120735 (+)
G110883 NA non-coding downstream 1318038 11349884 ~ 11350117 (+)
G110916 NA non-coding downstream 1639723 11671569 ~ 11672448 (+)
G110930 NA non-coding downstream 1761322 11793168 ~ 11793535 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 462150 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 1306360 8710750 ~ 8724066 (+)
G110445 NA other upstream 1853640 8175760 ~ 8176786 (+)
G110279 NA other upstream 2375232 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 3118172 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 2113899 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 2588216 12620062 ~ 12651815 (+)
G111197 NA other downstream 2979338 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 3901820 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 10905651 20937497 ~ 20944977 (+)

Expression


Co-expression Network