G110733 (LOC103376870)


Basic Information

Item Value
gene id G110733
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 10421561 ~ 10470060 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138687
tggtggtggtgtaatggtgtggaggatgttttcttggcacactttaggcccctttaggctcctctgacctctagcatcaacaaggcatttttgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtgttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctctaggtgagtgtgtatatgagagagagagagagagagaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138687 True 450 lncRNA 0.45 2 10421561 10470060

Neighbor

gene id symbol gene type direction distance location
AMCG00006584 NA coding downstream 35886 10375934 ~ 10385675 (-)
AMCG00006582 NA coding downstream 222875 10182177 ~ 10198686 (-)
AMCG00006578 zcrb1 coding downstream 305758 10110461 ~ 10115803 (-)
AMCG00006580 NA coding downstream 336727 10069022 ~ 10084834 (-)
AMCG00006572 NA coding downstream 795669 9624085 ~ 9625892 (-)
AMCG00006586 NA coding upstream 35991 10506051 ~ 10511361 (-)
AMCG00006587 NA coding upstream 51252 10521312 ~ 10527300 (-)
AMCG00006588 NA coding upstream 81368 10551428 ~ 10551733 (-)
AMCG00006591 nell2,LOC105908795,LOC108428412 coding upstream 169598 10639658 ~ 10653405 (-)
AMCG00006592 NA coding upstream 234013 10704073 ~ 10731630 (-)
G110720 NA non-coding downstream 116314 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 944055 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 1407235 9010140 ~ 9014326 (-)
G110369 psmc2 non-coding downstream 2512333 7907558 ~ 7909228 (-)
G110309 NA non-coding downstream 2664709 7756625 ~ 7756852 (-)
G110757 LOC103376870 non-coding upstream 133035 10603095 ~ 10603733 (-)
G110917 NA non-coding upstream 1201509 11671569 ~ 11672483 (-)
G110939 NA non-coding upstream 1318880 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 1319992 11790052 ~ 11793501 (-)
G110942 NA non-coding upstream 1324476 11794536 ~ 11796342 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 314276 10087275 ~ 10107285 (-)
G110605 NA other downstream 861457 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 1422297 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 1627499 8783905 ~ 8794062 (-)
G110507 NA other downstream 1697209 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 1547809 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 1579434 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 1601330 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 1667122 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 2406232 12876292 ~ 12878656 (-)

Expression


Co-expression Network