G110883


Basic Information

Item Value
gene id G110883
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 11349884 ~ 11350117 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138877
gaaccggcaacagggtcatgggcggccaaggctcactgatgcacgtggggagtgaaggctggcccgtgtggtccgatccagcagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccctgtccactgcca

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU138877 True 234 lncRNA 0.57 1 11349884 11350117

Neighbor

gene id symbol gene type direction distance location
AMCG00006606 NA coding upstream 27911 11305891 ~ 11321973 (+)
AMCG00006601 atp23,LOC106609469,LOC106576246 coding upstream 230415 11116560 ~ 11119469 (+)
AMCG00006594 NA coding upstream 476327 10856045 ~ 10873557 (+)
AMCG00006593 arid2,LOC106576411 coding upstream 520375 10828315 ~ 10829509 (+)
AMCG00006595 NA coding upstream 531280 10786260 ~ 10818604 (+)
AMCG00006610 NA coding downstream 308770 11658887 ~ 11706824 (+)
AMCG00006609 syn3,LOC106576044 coding downstream 384566 11734683 ~ 11735631 (+)
AMCG00006608 syn3 coding downstream 423869 11773986 ~ 11790179 (+)
AMCG00006614 ptpro coding downstream 533820 11883937 ~ 11902046 (+)
AMCG00006617 tbk1 coding downstream 637343 11987460 ~ 12000919 (+)
G110849 NA non-coding upstream 229149 11120390 ~ 11120735 (+)
G110722 NA non-coding upstream 979953 10369715 ~ 10369931 (+)
G110681 NA non-coding upstream 1318038 10030426 ~ 10031846 (+)
G110590 NA non-coding upstream 1892973 9456665 ~ 9456911 (+)
G110558 NA non-coding upstream 2461392 8887686 ~ 8888492 (+)
G110916 NA non-coding downstream 321452 11671569 ~ 11672448 (+)
G110930 NA non-coding downstream 443051 11793168 ~ 11793535 (+)
G111008 crebl2,crbl2 non-coding downstream 672693 12022810 ~ 12024549 (+)
G111063 NA non-coding downstream 1000640 12350757 ~ 12353363 (+)
G111148 NA non-coding downstream 1409454 12759571 ~ 12770925 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 1781608 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 2625818 8710750 ~ 8724066 (+)
G110445 NA other upstream 3173098 8175760 ~ 8176786 (+)
G110279 NA other upstream 3694690 7653672 ~ 7655194 (+)
G110163 LOC100846954 other upstream 4437630 6911876 ~ 6912254 (+)
AMCG00006624 NA other downstream 795628 12145745 ~ 12323278 (+)
AMCG00006636 NA other downstream 1269945 12620062 ~ 12651815 (+)
G111197 NA other downstream 1661067 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 2583549 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 9587380 20937497 ~ 20944977 (+)

Expression


Co-expression Network