G110917


Basic Information

Item Value
gene id G110917
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 11671569 ~ 11672483 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU138921
TTTTgaacaatttcatatttttattaagtgATTTCACAGGTTTTTATGCTGTAGATTCTAAAGCATTGATCAGAAAAGCTTCTTTTATAAGAAATCTTATTTCAGCGTTCTCTTTCCCAACAACAGACAAAACCAGCCACCTGATAAAATTCTCCTGCTGCCCTTGCATTAACAAAAGCAAGACTTAAtgtcacataataataataatacaaaaaacacttgaaaagatgcatcttatGCACTCTTTGCATTAATCTCGCCTGATTCCACTTCTTAAAATGCTGCGACTAGATTATAGTTTTAGGATTAACATTAGAAAGTGATTATGTTAAATATACAAACTCACTGGCCAGACAAACAACGCAAATTAGTGTCTAAGGCAGCTCCAACACAATCTATATGAGTGGGGAACTGTAGAAGTGGGGCTATGGAAAACttgaaaaagcttttttgtattaaagtcAGATTATGATTTTTTTGAATTCATATCATTTAGACAGTTCAAAGATTAATAGATGGTAAACTGACAGCCACCTAACATCTgtgatttaaatgaaacaaaccGATAGTTTGACACCCTGACTAGTCAACCCTCAAATATAAGATGTAAAATTAGGCAAATTAAGTATATATTAACAGGCACTCAAGAATCTAGTGAAAACTACATTATAACATACTGACATTTTTACCTGTTGtgacgtcctcaaggaccaaaggaaaggatcaaAGTGCAGGCTTTaaagttgaagcagataatccgataagggcaaaacgagagagcataaacagggacagtccaggtcaatcgATCTtgcgaacaggctagtagggagatccgaaaggggtaaacgagagagggaagcaaagaagctaggaaacagaggggtttaaatactgtgtagcaaagaggGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138921 True 915 lncRNA 0.36 1 11671569 11672483

Neighbor

gene id symbol gene type direction distance location
AMCG00006612 NA coding downstream 51745 11612595 ~ 11619824 (-)
AMCG00006607 fam19a2,LOC103364248,LOC108248567,LOC103023565 coding downstream 120008 11550314 ~ 11551561 (-)
AMCG00006602 NA coding downstream 440380 11213847 ~ 11231189 (-)
AMCG00006604 NA coding downstream 553703 11102085 ~ 11117866 (-)
AMCG00006605 NA coding downstream 618672 11052052 ~ 11052897 (-)
AMCG00006613 timp3,LOC106609153,LOC100696712 coding upstream 65736 11738219 ~ 11755480 (-)
AMCG00006611 rerg,LOC107569200 coding upstream 153418 11825901 ~ 11839726 (-)
AMCG00006615 NA coding upstream 235319 11907802 ~ 11931159 (-)
AMCG00006619 NA coding upstream 292785 11965268 ~ 11984815 (-)
AMCG00006626 NA coding upstream 669264 12341747 ~ 12346094 (-)
G110757 LOC103376870 non-coding downstream 1067836 10603095 ~ 10603733 (-)
G110733 LOC103376870 non-coding downstream 1201509 10421561 ~ 10470060 (-)
G110720 NA non-coding downstream 1366322 10304931 ~ 10305247 (-)
G110594 NA non-coding downstream 2194063 9476482 ~ 9477506 (-)
G110576 NA non-coding downstream 2657243 9010140 ~ 9014326 (-)
G110939 NA non-coding upstream 116457 11788940 ~ 11789234 (-)
G110940 NA non-coding upstream 117569 11790052 ~ 11793501 (-)
G110942 NA non-coding upstream 122053 11794536 ~ 11796342 (-)
G110957 NA non-coding upstream 227480 11899963 ~ 11902168 (-)
G111158 NA non-coding upstream 1087088 12759571 ~ 12760836 (-)
AMCG00006579 yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 other downstream 1564284 10087275 ~ 10107285 (-)
G110605 NA other downstream 2111465 9545495 ~ 9560104 (-)
G110570 LOC106576073 other downstream 2672305 8997637 ~ 8999264 (-)
G110520 bmt2 other downstream 2877507 8783905 ~ 8794062 (-)
G110507 NA other downstream 2947217 8722388 ~ 8724352 (-)
AMCG00006618 crebl2,LOC102781596 other upstream 345386 12017869 ~ 12024549 (-)
AMCG00006621 borcs5 other upstream 377011 12049494 ~ 12069660 (-)
AMCG00006622 lrp6 other upstream 398907 12071390 ~ 12130383 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other upstream 464699 12137182 ~ 12140405 (-)
AMCG00006641 mrps33,LOC106591474 other upstream 1203809 12876292 ~ 12878656 (-)

Expression


Co-expression Network