Gene
RNA
| Item | Value |
|---|---|
| gene id | G110939 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 11788940 ~ 11789234 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU138945 | True | 295 | lncRNA | 0.57 | 1 | 11788940 | 11789234 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006613 | timp3,LOC106609153,LOC100696712 | coding | downstream | 33460 | 11738219 ~ 11755480 (-) |
| AMCG00006612 | NA | coding | downstream | 169116 | 11612595 ~ 11619824 (-) |
| AMCG00006607 | fam19a2,LOC103364248,LOC108248567,LOC103023565 | coding | downstream | 237379 | 11550314 ~ 11551561 (-) |
| AMCG00006602 | NA | coding | downstream | 557751 | 11213847 ~ 11231189 (-) |
| AMCG00006604 | NA | coding | downstream | 671074 | 11102085 ~ 11117866 (-) |
| AMCG00006611 | rerg,LOC107569200 | coding | upstream | 36667 | 11825901 ~ 11839726 (-) |
| AMCG00006615 | NA | coding | upstream | 118568 | 11907802 ~ 11931159 (-) |
| AMCG00006619 | NA | coding | upstream | 176034 | 11965268 ~ 11984815 (-) |
| AMCG00006626 | NA | coding | upstream | 552513 | 12341747 ~ 12346094 (-) |
| AMCG00006627 | rpl18a,LOC106593275 | coding | upstream | 561533 | 12350767 ~ 12354277 (-) |
| G110917 | NA | non-coding | downstream | 116457 | 11671569 ~ 11672483 (-) |
| G110757 | LOC103376870 | non-coding | downstream | 1185207 | 10603095 ~ 10603733 (-) |
| G110733 | LOC103376870 | non-coding | downstream | 1318880 | 10421561 ~ 10470060 (-) |
| G110720 | NA | non-coding | downstream | 1483693 | 10304931 ~ 10305247 (-) |
| G110594 | NA | non-coding | downstream | 2311434 | 9476482 ~ 9477506 (-) |
| G110940 | NA | non-coding | upstream | 818 | 11790052 ~ 11793501 (-) |
| G110942 | NA | non-coding | upstream | 5302 | 11794536 ~ 11796342 (-) |
| G110957 | NA | non-coding | upstream | 110729 | 11899963 ~ 11902168 (-) |
| G111158 | NA | non-coding | upstream | 970337 | 12759571 ~ 12760836 (-) |
| G111182 | NA | non-coding | upstream | 1165376 | 12954610 ~ 12959628 (-) |
| AMCG00006579 | yaf2,LOC108439407,LOC105018284,LOC106573089,LOC106561625 | other | downstream | 1681655 | 10087275 ~ 10107285 (-) |
| G110605 | NA | other | downstream | 2228836 | 9545495 ~ 9560104 (-) |
| G110570 | LOC106576073 | other | downstream | 2789676 | 8997637 ~ 8999264 (-) |
| G110520 | bmt2 | other | downstream | 2994878 | 8783905 ~ 8794062 (-) |
| G110507 | NA | other | downstream | 3064588 | 8722388 ~ 8724352 (-) |
| AMCG00006618 | crebl2,LOC102781596 | other | upstream | 228635 | 12017869 ~ 12024549 (-) |
| AMCG00006621 | borcs5 | other | upstream | 260260 | 12049494 ~ 12069660 (-) |
| AMCG00006622 | lrp6 | other | upstream | 282156 | 12071390 ~ 12130383 (-) |
| AMCG00006625 | c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 | other | upstream | 347948 | 12137182 ~ 12140405 (-) |
| AMCG00006641 | mrps33,LOC106591474 | other | upstream | 1087058 | 12876292 ~ 12878656 (-) |
