G111063


Basic Information

Item Value
gene id G111063
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12350757 ~ 12353363 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139099
ttacacaaaattaactttatttttttattcaagcaCAGAGTCAACATTTTTAACGTTTCATTTAGAAGAACGTGTTTGGTCTCTTGGTGGTGAAACGTGGCTTGTGCTGGCGGCGAAGAACTCTGTGTGGCAGAGGGAACTTGATCTTGGACATGGAACTGCTTGATCGCAGGTCTGCGACACTTGTTGGCAGCGATCTCCTCCACCTTCATGATCTGGATGGCGTGAGCTCGAGCACGATGGCGAGCCCCCATATCACGGTCTGAAAAAATCATGAAATGTAGGGAGGGGTCATAAAGATGGTGCTGCAACTGAATAAAATCCCACttctcattaaattaaatgggacATTTCATGTCTCACACTCAAGACACTGGCCCAGTAAAATCTTGAAGGAGAAAGTTAGAAAAATTGTACCGTAAGTCactcaacacaaaaacaaatgatgttGATTAAAATACTGACACCCAAAGGtagaattcaaaaacaaaaaggcaaataaTTTCAGAGATCGGCTCAGCATAAACTCCTTATTGTTTAGCAATCCAGTTCAGGACAGTTTAGTCTAGAAACATGTTTATACAACTGGCAACAGCACTGAgtagttttttttacagattaatTCACTAAAACCACAATTAAGTACAAGGTCTGgaataactaaaatgtaaatgttgcacagaattaaaagaaaaaaagacagcgTTTTAGCAAGCCTTACCTGCTTCTAAGTGCATGATTTACCTTTCAAGACAAACTTTAATGACTCATACGCCAGGACTCATGAAGATTAAACCCACATCATTACATGTCATACTTTGTAAAGCCTCTAGGAGTGTTAATACACAATCTACCTTCTATAAAATGTCTAAAAGAAAGATCTTAGAATTTGAAGACAAGACAATAATTAAATCTTAAGATGTTGAACCTTGATTTCACTTCCATCAGCACAGCAGCACATGAAAGGCGACAAGGTACTGTTTCTTTGTGCACACATGACAAGAGCATTATACACGGTTATAATGACCTTTGGGTTTGTGTGCAATGGCAGCCAGTTCTCAAGCCAATTGTGGGGGAGATATTGAATTCCctcattatatttttgtattaaccTATTTGATATTATACTCAGTACAAAAAGAGACTCAGACAAAGATTGCTGAAATATGATTTACATCTGTGCCCGTCTTCAGCAAGATGCATGTAGCGTGTCTGGATGAGAGAAACCTGTTGCGGGGTCAGAGAGACACTTACAGCACTGAGTGACTGCTGCAGCAGTGGTCAAGTCCCGGTACTCTCTGTACATGTTGTGGGTGCCACTGCGAGAGTCGTAACGCAGCCAGATACCAAAGTTCTTCACCTTCAGGGGAGTCTTCTCATGGACCTATCACAGTAGACAATTTCTCCAGAAGCCTTCTTCATCTTCCTCAGCTGAGAGACAAAATACCAGAAGCGGGACTTGGCCACCACATGGTTTGGGGCAAAGATCCTCATGCGATACAGAGGAGGGGTGGGATTCTTGGGAGAGGGCAGCAGGCGCCCAACCACTTTATATTCCCTCAgctgaagagaaaacacaccAAGGGAAagttgtgttattgtgttgctGTGACACTAGTATTCCAACCAACAAAACCCTCATCTTCAAGATCacattatgttaaaaaataaatattgaaccCTGATTTCACTTTCAGGAGCACAGCAGCCCCTGAAAGGCGACAAGGTACTATTTGATCTCTGCACAACAGACAAGAgcattacagaaataataatgatctttGGGTTTTGTGTGCATTAGAGAATTCCCTCCATGAAAACGTGATCATTAAATCCACATACAAATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139099 True 1850 lncRNA 0.41 3 12350757 12353363

Neighbor

gene id symbol gene type direction distance location
AMCG00006630 LOC104940688,LOC102079147,LOC106573136,LOC104946814 coding upstream 17503 12332334 ~ 12333254 (+)
AMCG00006629 NA coding upstream 22604 12326835 ~ 12328153 (+)
AMCG00006616 NA coding upstream 296730 12031655 ~ 12054027 (+)
AMCG00006620 NA coding upstream 336436 12013086 ~ 12014321 (+)
AMCG00006617 tbk1 coding upstream 349838 11987460 ~ 12000919 (+)
AMCG00006623 xpot,LOC102775766 coding downstream 2690 12356053 ~ 12374775 (+)
AMCG00006631 NA coding downstream 27964 12381327 ~ 12387504 (+)
AMCG00006632 kiaa0930,zgc:172139,LOC107562136,LOC107687566,LOC107719873,LOC107699202 coding downstream 71843 12425206 ~ 12431044 (+)
AMCG00006635 NA coding downstream 176977 12530340 ~ 12540008 (+)
AMCG00006639 LOC107562148,LOC107741714,LOC105912408,LOC107687569 coding downstream 264154 12617517 ~ 12618947 (+)
G111008 crebl2,crbl2 non-coding upstream 326208 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 557222 11793168 ~ 11793535 (+)
G110916 NA non-coding upstream 678309 11671569 ~ 11672448 (+)
G110883 NA non-coding upstream 1000640 11349884 ~ 11350117 (+)
G110849 NA non-coding upstream 1230022 11120390 ~ 11120735 (+)
G111148 NA non-coding downstream 406208 12759571 ~ 12770925 (+)
G111161 NA non-coding downstream 492560 12845923 ~ 12847502 (+)
G111240 NA non-coding downstream 1000593 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 1104676 13458039 ~ 13502571 (+)
G111420 NA non-coding downstream 1782956 14136319 ~ 14137744 (+)
AMCG00006624 NA other upstream 27479 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 2782481 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 3626691 8710750 ~ 8724066 (+)
G110445 NA other upstream 4173971 8175760 ~ 8176786 (+)
G110279 NA other upstream 4695563 7653672 ~ 7655194 (+)
AMCG00006636 NA other downstream 266699 12620062 ~ 12651815 (+)
G111197 NA other downstream 657821 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 1580303 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 8584134 20937497 ~ 20944977 (+)
G112567 NA other downstream 8694973 21048336 ~ 21049038 (+)

Expression


Co-expression Network