G111161


Basic Information

Item Value
gene id G111161
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 12845923 ~ 12847502 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139223
AATGTTTCATGCACTTCTTTAATATATCAGTTTTCCATAttcacaacaaatacatttacctCTTTTATCCTTTAATATAATAcagtcttttaaatatttttacacaGAAATAAAGTTTCTCAGAATTTCATCTATCAAAacgtttttttgtgtttgtttgttttttttgtatgttttagtcGCCATGCCTTCTAGCAAACTGACAATATTTTCATTGTACAAATTTACAAGTGAAATGAACTTCCCAAAATAAGGGCTAATGATAAGTTAggatggtggtggggggggggaaaaggTTCAGGCAAAGTGGGGAGTGGAAAATTGGCATCGATGAGTTTACAGGACAGGAAAGAGGGCACACAGGGGTGAACTACAGtcttaaaaacatacagaaaaaaacaagggCTAACCATACAAAGTGAAAGTGACTTTCAAATCGACAGAATGGAACACGCTTAAAAGATATACCTCTGTAACAACAttcttctcttttaaaaataaaaataaatatataaaataaatacagcactcTGAAAACATACACTCCCATGAATTCCTCATTTTGAGCATCTTCTGTACGCAGGGTTACGTGGAACAGCCATATTCCTATGGAGCACCTCACTGTACCAACAGGTCCATCAAAACTATGTTACGGTAGTCATTTGCATTTCAACTCTTTTTAAACCAATTACattatatgcatgtgtgtgtgtgtgcatatacacacacacacacacacattatacacgtatacacacaaacacacactagcAGTCAAAAAGATGGGGTTATGTTAGATCCACCTGAAAACACTATAAACCACCTACTGGGGCTTCTGCACATGTTTGTAATCTATTcggaaaagaaaatataactgaGGAAACCTTTTACTGACATTTCCCCTCAGCTAATCCCACAATTCTATTAGCTCTTCTTACAGAGCAGAAAGGAGagattgtcattgttttgtgtaGTATTTCGCCTCAAATCCTGGGGTGATTAGATTTGGCTTCCTTTTTCTCTACTGAACAAATAGGAAATCGAGCAACAACATACTAAACATactaaataaatcacaacaatCTGAGCAAGAACAGGTTTCAGGACTGATTGACTTGCCTCCCCAGCTGCCCGACTTTAACCCGCTAAAATATTACAGGATCTGTATGGCAGGTGAAGCAACCActgtaaatatgcaaataataaaaccgTTTAGCAATTTCCTCTGCagatgaatatttgtatttcaaatcaaCAATTCACACAGATTCTAACGTTCACTGCAGTGAAGTAAGAAGATGTCCGCCAGCCCCTGCTTTTGACCACCAGCATGTGTAAACGCATATTCATCCATagacatatatgtatacacacacacacacacacacacaacgcagaGACCAAAGCTTTCCACAAAATGTTGCTGTCCAACAGGTATCCAATAAGAGCACAGCGCTAGGACAGCTGTTTTAGTCATTTACACTTTTGTAATAGTCAAGGGTCTGAGGGAATTAAAAGTTCCCAATTTTTAATACAGATATAACTGCTGTAATTAGGGGTACAATATTTGTAACAATAAA

Function

NR:

description
PREDICTED: C-C chemokine receptor type 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139223 True 1580 lncRNA 0.37 1 12845923 12847502

Neighbor

gene id symbol gene type direction distance location
AMCG00006640 LOC103371429,LOC103459365,LOC103382520,LOC101068332,LOC100696994 coding upstream 129758 12714480 ~ 12716165 (+)
AMCG00006638 kcna1a,LOC105912431,LOC105913409,LOC108279524,LOC103366871 coding upstream 192503 12651939 ~ 12653420 (+)
AMCG00006639 LOC107562148,LOC107741714,LOC105912408,LOC107687569 coding upstream 226976 12617517 ~ 12618947 (+)
AMCG00006635 NA coding upstream 305915 12530340 ~ 12540008 (+)
AMCG00006632 kiaa0930,zgc:172139,LOC107562136,LOC107687566,LOC107719873,LOC107699202 coding upstream 414879 12425206 ~ 12431044 (+)
AMCG00006646 tmem178b,LOC107725619,LOC107694293,LOC107655552,LOC107757211 coding downstream 36274 12883776 ~ 12888236 (+)
AMCG00006645 tmem178b,LOC106576670 coding downstream 90824 12938326 ~ 12954435 (+)
AMCG00006650 mkrn1,LOC107757257,LOC107549191,LOC107694290,LOC107725576 coding downstream 168151 13015653 ~ 13035434 (+)
AMCG00006653 NA coding downstream 189171 13036673 ~ 13037830 (+)
AMCG00006659 NA coding downstream 424995 13272497 ~ 13283101 (+)
G111148 NA non-coding upstream 74998 12759571 ~ 12770925 (+)
G111063 NA non-coding upstream 492560 12350757 ~ 12353363 (+)
G111008 crebl2,crbl2 non-coding upstream 821374 12022810 ~ 12024549 (+)
G110930 NA non-coding upstream 1052388 11793168 ~ 11793535 (+)
G110916 NA non-coding upstream 1173475 11671569 ~ 11672448 (+)
G111240 NA non-coding downstream 506454 13353956 ~ 13357071 (+)
G111272 hmga2 non-coding downstream 610537 13458039 ~ 13502571 (+)
G111420 NA non-coding downstream 1288817 14136319 ~ 14137744 (+)
G111443 NA non-coding downstream 1464250 14311752 ~ 14312024 (+)
G111531 NA non-coding downstream 1781224 14628726 ~ 14632980 (+)
AMCG00006636 NA other upstream 194108 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 522645 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 3277647 9563952 ~ 9568276 (+)
AMCG00006552 NA other upstream 4121857 8710750 ~ 8724066 (+)
G110445 NA other upstream 4669137 8175760 ~ 8176786 (+)
G111197 NA other downstream 163682 13011184 ~ 13043448 (+)
AMCG00006672 NA other downstream 1086164 13933666 ~ 13939475 (+)
AMCG00006811 NA other downstream 8089995 20937497 ~ 20944977 (+)
G112567 NA other downstream 8200834 21048336 ~ 21049038 (+)
G112600 NA other downstream 8295363 21142865 ~ 21203201 (+)

Expression


Co-expression Network