Gene
RNA
| Item | Value |
|---|---|
| gene id | G111389 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 14003753 ~ 14004141 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139505 | True | 389 | lncRNA | 0.54 | 1 | 14003753 | 14004141 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006673 | NA | coding | downstream | 39903 | 13957481 ~ 13963850 (-) |
| AMCG00006670 | grip1 | coding | downstream | 277324 | 13668758 ~ 13726429 (-) |
| AMCG00006669 | tmbim4,LOC107757272,LOC107587136,LOC107567270,LOC107694279 | coding | downstream | 387564 | 13610273 ~ 13616189 (-) |
| AMCG00006662 | LOC106576661 | coding | downstream | 430290 | 13560457 ~ 13573463 (-) |
| AMCG00006664 | NA | coding | downstream | 453462 | 13539598 ~ 13550291 (-) |
| AMCG00006677 | NA | coding | upstream | 97281 | 14101422 ~ 14103070 (-) |
| AMCG00006675 | NA | coding | upstream | 116297 | 14120438 ~ 14123758 (-) |
| AMCG00006676 | NA | coding | upstream | 126639 | 14130780 ~ 14133087 (-) |
| AMCG00006678 | NA | coding | upstream | 134924 | 14139065 ~ 14154332 (-) |
| AMCG00006681 | NA | coding | upstream | 248044 | 14252185 ~ 14270691 (-) |
| G111182 | NA | non-coding | downstream | 1044125 | 12954610 ~ 12959628 (-) |
| G111158 | NA | non-coding | downstream | 1242917 | 12759571 ~ 12760836 (-) |
| G110957 | NA | non-coding | downstream | 2101585 | 11899963 ~ 11902168 (-) |
| G110942 | NA | non-coding | downstream | 2207411 | 11794536 ~ 11796342 (-) |
| G110940 | NA | non-coding | downstream | 2210252 | 11790052 ~ 11793501 (-) |
| G111421 | NA | non-coding | upstream | 132187 | 14136328 ~ 14137746 (-) |
| G111448 | rap1b,LOC106576640,LOC107695907 | non-coding | upstream | 163990 | 14168131 ~ 14214816 (-) |
| G111451 | NA | non-coding | upstream | 178640 | 14182781 ~ 14299856 (-) |
| G111466 | slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 | non-coding | upstream | 240461 | 14244602 ~ 14246174 (-) |
| G111452 | NA | non-coding | upstream | 286326 | 14290467 ~ 14295549 (-) |
| AMCG00006663 | hmga2 | other | downstream | 500525 | 13455432 ~ 13503228 (-) |
| AMCG00006641 | mrps33,LOC106591474 | other | downstream | 1125097 | 12876292 ~ 12878656 (-) |
| AMCG00006625 | c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 | other | downstream | 1863348 | 12137182 ~ 12140405 (-) |
| AMCG00006622 | lrp6 | other | downstream | 1873370 | 12071390 ~ 12130383 (-) |
| AMCG00006621 | borcs5 | other | downstream | 1934093 | 12049494 ~ 12069660 (-) |
| G111489 | NA | other | upstream | 356087 | 14360228 ~ 14364422 (-) |
| G111621 | NA | other | upstream | 707876 | 14712017 ~ 14753970 (-) |
| G111767 | LOC107575789 | other | upstream | 1748680 | 15752821 ~ 15753235 (-) |
| AMCG00006719 | NA | other | upstream | 1876989 | 15881130 ~ 15896869 (-) |
| G112059 | NA | other | upstream | 3628750 | 17632891 ~ 17633445 (-) |
