G111421


Basic Information

Item Value
gene id G111421
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14136328 ~ 14137746 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139544
NNCAGATACATAAACTGCAATAGATCTCTAATTCCATATTTGAATGCAAATAGATTCTGTATTATCTAAAGTCATTACTGAGTCAGTGATACATTTCTTTTCTTGACACCTTTTGTTCTAAAATGTTTCAAAGAAAAAGATACTTGTGTAATATGAACCCATCTGGTATGAAACTTGTATAAATTACTGTAAGAGTATCGTTAAAGGTGGTTCAGGTCTCCTCTTCTAGAACATCTTTCAGTCTGTACTTAAGTGGAAACAAACTTTTAGTTAGTCTATGTTGCTAGATGTTTAAAGTTTACATTtactaaaacacatttttacaatgaTCACAATATTTTGACTTTCTTCACTAAACTGCAGATTTTACAGTACAATACTTTTTTACAGGACAAAagcttttgtaaaatgttatcaaTATTTTTAAGCTGTATGCAGGGAGATTCTCTTTAGTGCTATTAATagacattaatatatttttttactgtttgtCACAAACCAGCAGTATGTAAAGATTGGGTTAAgtgtaaaacataaaactttATAATTTGGAAGGAACAGCAGAAGTACTTTAAATGTTAAAGTAGGTTAAGCAAAAAAACTTTGTATGTaaagatgtttccatttcacTGGTCACAgccatcatcatcagcctacaCAACTGCTTCCCAATCTTTACTCGTAAAGAAAAGAGAAGCACGATACTTAAACGGTAGACATAGGTGGCTGGTCAGAGAATATTAAACCAGGTAACGGATTTGGAAGAGAAACAGTTTTCTGATGACCATAGGATTTCTGTCAAATACGTTTTATTTTAGAATGGTGAAATGAGATCAATATTTGTATGCAGTATTCAGGGAAATTCTCTTTGGTGCTTTTAATACAGACAGGTTGATATTTTTCCATCAGTGTTCATCAAATCACCAAGCTTCAGCAATGTATACAATCTGGGTTAGTGTAActgtaaaactttattttacttttaatttgaagAGTTTGTCACATTACAAAGTATAGCATAGCTACTCATACAGAACcaatatgtaggcctatagtTCATATATGCTAGAAATGTGTCATCCTTATAGTTTTCAGGTTCTAAAATATGGCTcctttgtttgtatatttaaaatatatcagatataatttaaatatattttactctgtaatccatgtattttatagattgtatatatacatatacagctctggaaaagcTTAAGAGGCCACTGCAGATTCTTCTTAAACCAGCATccctacatgtatggcagccattccattccattcatatttttatttggaatttgggagaaatgttgtcagtagtttatagaataaaacaaagatgttcattttacccaaacacatacctataaatagtaaaaccagagaaactgataattttgcagtggtctcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139544 True 1419 lncRNA 0.31 1 14136328 14137746

Neighbor

gene id symbol gene type direction distance location
AMCG00006676 NA coding downstream 3241 14130780 ~ 14133087 (-)
AMCG00006675 NA coding downstream 12570 14120438 ~ 14123758 (-)
AMCG00006677 NA coding downstream 33258 14101422 ~ 14103070 (-)
AMCG00006673 NA coding downstream 172478 13957481 ~ 13963850 (-)
AMCG00006670 grip1 coding downstream 409899 13668758 ~ 13726429 (-)
AMCG00006678 NA coding upstream 1319 14139065 ~ 14154332 (-)
AMCG00006681 NA coding upstream 114439 14252185 ~ 14270691 (-)
AMCG00006687 NA coding upstream 227896 14365642 ~ 14366487 (-)
AMCG00006690 LOC103382512 coding upstream 238582 14376328 ~ 14388386 (-)
AMCG00006695 NA coding upstream 449003 14586749 ~ 14632771 (-)
G111389 NA non-coding downstream 132187 14003753 ~ 14004141 (-)
G111182 NA non-coding downstream 1176700 12954610 ~ 12959628 (-)
G111158 NA non-coding downstream 1375492 12759571 ~ 12760836 (-)
G110957 NA non-coding downstream 2234160 11899963 ~ 11902168 (-)
G110942 NA non-coding downstream 2339986 11794536 ~ 11796342 (-)
G111448 rap1b,LOC106576640,LOC107695907 non-coding upstream 30385 14168131 ~ 14214816 (-)
G111451 NA non-coding upstream 45035 14182781 ~ 14299856 (-)
G111466 slc35e3,LOC106609860,LOC106576641,LOC107737854,LOC107710682 non-coding upstream 106856 14244602 ~ 14246174 (-)
G111452 NA non-coding upstream 152721 14290467 ~ 14295549 (-)
G111478 NA non-coding upstream 173981 14311727 ~ 14312024 (-)
AMCG00006663 hmga2 other downstream 633100 13455432 ~ 13503228 (-)
AMCG00006641 mrps33,LOC106591474 other downstream 1257672 12876292 ~ 12878656 (-)
AMCG00006625 c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 other downstream 1995923 12137182 ~ 12140405 (-)
AMCG00006622 lrp6 other downstream 2005945 12071390 ~ 12130383 (-)
AMCG00006621 borcs5 other downstream 2066668 12049494 ~ 12069660 (-)
G111489 NA other upstream 222482 14360228 ~ 14364422 (-)
G111621 NA other upstream 574271 14712017 ~ 14753970 (-)
G111767 LOC107575789 other upstream 1615075 15752821 ~ 15753235 (-)
AMCG00006719 NA other upstream 1743384 15881130 ~ 15896869 (-)
G112059 NA other upstream 3495145 17632891 ~ 17633445 (-)

Expression


Co-expression Network