G111443


Basic Information

Item Value
gene id G111443
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14311752 ~ 14312024 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139569
ctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139569 True 273 lncRNA 0.48 1 14311752 14312024

Neighbor

gene id symbol gene type direction distance location
AMCG00006682 LOC106609801,LOC107717680 coding upstream 3180 14302226 ~ 14308572 (+)
AMCG00006686 cpsf6,LOC107729149 coding upstream 13775 14277475 ~ 14297977 (+)
AMCG00006679 slc35e3,LOC107710682,LOC106609860,LOC106576641 coding upstream 59805 14227387 ~ 14251947 (+)
AMCG00006680 NA coding upstream 90501 14206121 ~ 14221251 (+)
AMCG00006674 dyrk2,LOC107757277,LOC107573871,LOC107694272,LOC107587139,LOC107655591 coding upstream 325564 13977737 ~ 13986188 (+)
AMCG00006683 NA coding downstream 9000 14321024 ~ 14352438 (+)
AMCG00006684 cct2 coding downstream 45941 14357965 ~ 14364176 (+)
AMCG00006685 NA coding downstream 57789 14369813 ~ 14376801 (+)
AMCG00006691 NA coding downstream 82022 14394046 ~ 14395217 (+)
AMCG00006689 NA coding downstream 113745 14425769 ~ 14441636 (+)
G111420 NA non-coding upstream 174008 14136319 ~ 14137744 (+)
G111272 hmga2 non-coding upstream 809181 13458039 ~ 13502571 (+)
G111240 NA non-coding upstream 954681 13353956 ~ 13357071 (+)
G111161 NA non-coding upstream 1464250 12845923 ~ 12847502 (+)
G111148 NA non-coding upstream 1540827 12759571 ~ 12770925 (+)
G111531 NA non-coding downstream 316702 14628726 ~ 14632980 (+)
G111562 NA non-coding downstream 424178 14736202 ~ 14737639 (+)
G111629 NA non-coding downstream 482694 14794718 ~ 14794949 (+)
G111635 NA non-coding downstream 497224 14809248 ~ 14811063 (+)
G111645 NA non-coding downstream 581775 14893799 ~ 14895938 (+)
AMCG00006672 NA other upstream 372277 13933666 ~ 13939475 (+)
G111197 NA other upstream 1268304 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 1659937 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 1988474 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 4743476 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 6625473 20937497 ~ 20944977 (+)
G112567 NA other downstream 6736312 21048336 ~ 21049038 (+)
G112600 NA other downstream 6830841 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6953229 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 7305608 21617632 ~ 21622508 (+)

Expression


Co-expression Network