Gene
RNA
| Item | Value |
|---|---|
| gene id | G111626 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 14733170 ~ 14734171 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139793 | True | 398 | lncRNA | 0.39 | 2 | 14733170 | 14734171 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006696 | NA | coding | downstream | 67371 | 14644607 ~ 14665799 (-) |
| AMCG00006695 | NA | coding | downstream | 100399 | 14586749 ~ 14632771 (-) |
| AMCG00006690 | LOC103382512 | coding | downstream | 344784 | 14376328 ~ 14388386 (-) |
| AMCG00006687 | NA | coding | downstream | 366683 | 14365642 ~ 14366487 (-) |
| AMCG00006681 | NA | coding | downstream | 462479 | 14252185 ~ 14270691 (-) |
| AMCG00006698 | NA | coding | upstream | 74690 | 14808861 ~ 14818516 (-) |
| AMCG00006702 | NA | coding | upstream | 171377 | 14905548 ~ 14927342 (-) |
| AMCG00006706 | kcnc2,LOC103383062 | coding | upstream | 830428 | 15564599 ~ 15574755 (-) |
| AMCG00006707 | NA | coding | upstream | 893045 | 15627216 ~ 15631171 (-) |
| AMCG00006711 | NA | coding | upstream | 952521 | 15686692 ~ 15691047 (-) |
| G111622 | NA | non-coding | downstream | 2701 | 14728971 ~ 14730469 (-) |
| G111481 | NA | non-coding | downstream | 358860 | 14336701 ~ 14374310 (-) |
| G111478 | NA | non-coding | downstream | 421146 | 14311727 ~ 14312024 (-) |
| G111451 | NA | non-coding | downstream | 433314 | 14182781 ~ 14299856 (-) |
| G111630 | NA | non-coding | upstream | 60547 | 14794718 ~ 14794949 (-) |
| G111728 | NA | non-coding | upstream | 803305 | 15537476 ~ 15537836 (-) |
| G111730 | NA | non-coding | upstream | 823772 | 15557943 ~ 15558201 (-) |
| G111736 | NA | non-coding | upstream | 923827 | 15657998 ~ 15659412 (-) |
| G111759 | NA | non-coding | upstream | 994442 | 15728613 ~ 15729533 (-) |
| G111489 | NA | other | downstream | 368748 | 14360228 ~ 14364422 (-) |
| AMCG00006663 | hmga2 | other | downstream | 1229942 | 13455432 ~ 13503228 (-) |
| AMCG00006641 | mrps33,LOC106591474 | other | downstream | 1854514 | 12876292 ~ 12878656 (-) |
| AMCG00006625 | c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 | other | downstream | 2592765 | 12137182 ~ 12140405 (-) |
| AMCG00006622 | lrp6 | other | downstream | 2602787 | 12071390 ~ 12130383 (-) |
| G111767 | LOC107575789 | other | upstream | 1018650 | 15752821 ~ 15753235 (-) |
| AMCG00006719 | NA | other | upstream | 1146959 | 15881130 ~ 15896869 (-) |
| G112059 | NA | other | upstream | 2898720 | 17632891 ~ 17633445 (-) |
| AMCG00006754 | NA | other | upstream | 3605099 | 18339270 ~ 18366562 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 4888984 | 19623155 ~ 19631895 (-) |
