G111629


Basic Information

Item Value
gene id G111629
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14794718 ~ 14794949 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139796
AACGCCATGCATACTCCTGGTACGTTAACACAACAGAATAGAAGAACCGTAGAAACACATATAATTGGCAATTGTTTTGCATACACTATACGAATCACTTCTACACATCCAGTACTGTAGACAACTCTGTGCTGTGATTTCTGCCCATCAGATGCCACTTCTGTCCGAAGAAAAGCGCCTTTGCAGAAATAATCCATTATACTGATACAGGCGGATAGTGTCTATTGAAACC

Function

NR:

description
FH1/FH2 domain-containing protein 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139796 True 232 lncRNA 0.41 1 14794718 14794949

Neighbor

gene id symbol gene type direction distance location
AMCG00006697 NA coding upstream 14244 14771451 ~ 14780474 (+)
AMCG00006694 NA coding upstream 218446 14574681 ~ 14576272 (+)
AMCG00006693 kcnmb4 coding upstream 221306 14549343 ~ 14573412 (+)
AMCG00006692 cnot2,LOC108275083,LOC105023108,LOC105901945,LOC108436929 coding upstream 253372 14514304 ~ 14541346 (+)
AMCG00006688 NA coding upstream 328832 14450266 ~ 14465886 (+)
AMCG00006701 NA coding downstream 68865 14863814 ~ 14891825 (+)
AMCG00006700 tmem19,LOC106594838 coding downstream 136074 14931023 ~ 14937252 (+)
AMCG00006699 rab21,LOC106609839 coding downstream 153222 14948171 ~ 14963480 (+)
AMCG00006704 NA coding downstream 183744 14978693 ~ 15002282 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding downstream 211363 15006312 ~ 15037025 (+)
G111562 NA non-coding upstream 57079 14736202 ~ 14737639 (+)
G111531 NA non-coding upstream 161738 14628726 ~ 14632980 (+)
G111443 NA non-coding upstream 482694 14311752 ~ 14312024 (+)
G111420 NA non-coding upstream 656974 14136319 ~ 14137744 (+)
G111272 hmga2 non-coding upstream 1292147 13458039 ~ 13502571 (+)
G111635 NA non-coding downstream 14299 14809248 ~ 14811063 (+)
G111645 NA non-coding downstream 98850 14893799 ~ 14895938 (+)
G111666 NA non-coding downstream 145259 14940208 ~ 14942924 (+)
G111699 NA non-coding downstream 400345 15195294 ~ 15200003 (+)
G111726 NA non-coding downstream 681205 15476154 ~ 15476714 (+)
AMCG00006672 NA other upstream 855243 13933666 ~ 13939475 (+)
G111197 NA other upstream 1751270 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 2142903 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 2471440 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 5226442 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 6142548 20937497 ~ 20944977 (+)
G112567 NA other downstream 6253387 21048336 ~ 21049038 (+)
G112600 NA other downstream 6347916 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6470304 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 6822683 21617632 ~ 21622508 (+)

Expression


Co-expression Network