G111666


Basic Information

Item Value
gene id G111666
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 14940208 ~ 14942924 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139833
cggacatctgcgctacaagaatgcGAAGCAATATGTTTTGGAACTGCCAAGATATCCACCAATCAGCGCAGCGTGTTTGAAATACGTCACGGCGCGGCACCTTCCACCTCGCATAAGAAGCGAACAGGTGCGTCAGCCGCAGCCAGCGGAGACAACACGCACAGATTGAAAATGAGTTCGGAGAAAGTGTTGCAGAAAACTCTCCATCCGAACCAGCAACCTCCAACACAAAGTTCATCAAGACGAAAGAAGATTCAAGCGAAGAGTGACATCAGGAGTCCAACAGATAATCTGGTGTCTCCTTGTACACGCAAGCTACTGAAGAAGCCTGATAAAACTGTCAAACCCTTGCCGCAGGTGCCTAAGTTTTCAGTGGAAGATAAGGAAAATGCTGCAGTCTTTTCCAGAAAATGAAGCATAAGTTGCCTGACGGTTTTGGGCTTTGGTGACAAATGTCCATGTATTCTTTAATACAGAATCACTTGTTGcatgtttgctttgttgtaCATCAATGTGTTCCTTAAATGAATTGTGTGATTTGCATTGTTATTAAATGGTATCCCTTAAAACCAAATGCTGGTGAGCTCTGTTACAAACCTTGCAGAGCAGCTTGAAGTGGTGCTTTTAATTGGAGTATTAAAGATTTTACAAATCTGTTGGCCTTTTGTTTTAATGGGGATCTCTGACCCTGTTCAGTTGACTTCACAAGCTGTAGCAAGGGGCCTGAAGAGAGAAATTGTGGTTCTGTAGTTAATGTTGCAAATTGTGTGGAATGGGGGGCCAGGGAAGATGCTAATGCACAATGAGCTAGGCTTAAGACTGTCTTTGCTGTTGAAACTGGTGGGAAATGTTTGAATTTCTGAGTGCTGCTATTTAACTGATCATGCCTTATTTCGGTGCATTGATgcaccttttttgttttgttaagaaaaaataatccgTTACAGAAACCatattaaattcaaatacaatttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139833 True 975 lncRNA 0.42 4 14940208 14942924

Neighbor

gene id symbol gene type direction distance location
AMCG00006700 tmem19,LOC106594838 coding upstream 2956 14931023 ~ 14937252 (+)
AMCG00006701 NA coding upstream 48383 14863814 ~ 14891825 (+)
AMCG00006697 NA coding upstream 159734 14771451 ~ 14780474 (+)
AMCG00006694 NA coding upstream 363936 14574681 ~ 14576272 (+)
AMCG00006693 kcnmb4 coding upstream 366796 14549343 ~ 14573412 (+)
AMCG00006699 rab21,LOC106609839 coding downstream 5247 14948171 ~ 14963480 (+)
AMCG00006704 NA coding downstream 35769 14978693 ~ 15002282 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding downstream 63388 15006312 ~ 15037025 (+)
AMCG00006705 NA coding downstream 123964 15066888 ~ 15067622 (+)
AMCG00006709 krr1,LOC107395694 coding downstream 731503 15674427 ~ 15683069 (+)
G111645 NA non-coding upstream 44270 14893799 ~ 14895938 (+)
G111635 NA non-coding upstream 129145 14809248 ~ 14811063 (+)
G111629 NA non-coding upstream 145259 14794718 ~ 14794949 (+)
G111562 NA non-coding upstream 202569 14736202 ~ 14737639 (+)
G111531 NA non-coding upstream 307228 14628726 ~ 14632980 (+)
G111699 NA non-coding downstream 252370 15195294 ~ 15200003 (+)
G111726 NA non-coding downstream 533230 15476154 ~ 15476714 (+)
G111727 NA non-coding downstream 594505 15537429 ~ 15537841 (+)
G111764 NA non-coding downstream 799514 15742438 ~ 15742652 (+)
G111786 NA non-coding downstream 841595 15784519 ~ 15784762 (+)
AMCG00006672 NA other upstream 1000733 13933666 ~ 13939475 (+)
G111197 NA other upstream 1896760 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 2288393 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 2616930 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 5371932 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 5994573 20937497 ~ 20944977 (+)
G112567 NA other downstream 6105412 21048336 ~ 21049038 (+)
G112600 NA other downstream 6199941 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 6322329 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 6674708 21617632 ~ 21622508 (+)

Expression


Co-expression Network