G111764


Basic Information

Item Value
gene id G111764
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15742438 ~ 15742652 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139943
gagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggacaaacaagtcagatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgaggggtcagggctgtttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139943 True 215 lncRNA 0.52 1 15742438 15742652

Neighbor

gene id symbol gene type direction distance location
AMCG00006710 NA coding upstream 16298 15720053 ~ 15726140 (+)
AMCG00006708 NA coding upstream 24100 15713827 ~ 15718338 (+)
AMCG00006709 krr1,LOC107395694 coding upstream 59369 15674427 ~ 15683069 (+)
AMCG00006705 NA coding upstream 674816 15066888 ~ 15067622 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding upstream 705413 15006312 ~ 15037025 (+)
AMCG00006713 NA coding downstream 24459 15767111 ~ 15798662 (+)
AMCG00006721 zdhhc17,LOC102798393,LOC107708015 coding downstream 256744 15999396 ~ 16030884 (+)
AMCG00006724 NA coding downstream 592458 16335110 ~ 16345016 (+)
AMCG00006725 NA coding downstream 611798 16354450 ~ 16356424 (+)
AMCG00006726 NA coding downstream 635128 16377780 ~ 16425206 (+)
G111727 NA non-coding upstream 204597 15537429 ~ 15537841 (+)
G111726 NA non-coding upstream 265724 15476154 ~ 15476714 (+)
G111699 NA non-coding upstream 542435 15195294 ~ 15200003 (+)
G111666 NA non-coding upstream 799514 14940208 ~ 14942924 (+)
G111645 NA non-coding upstream 846500 14893799 ~ 14895938 (+)
G111786 NA non-coding downstream 41867 15784519 ~ 15784762 (+)
G111788 LOC106576514 non-coding downstream 107269 15849921 ~ 15869801 (+)
G111898 NA non-coding downstream 972166 16714818 ~ 16722048 (+)
G111909 NA non-coding downstream 1036750 16779402 ~ 16810470 (+)
G111941 NA non-coding downstream 1120504 16863156 ~ 16863355 (+)
AMCG00006672 NA other upstream 1802963 13933666 ~ 13939475 (+)
G111197 NA other upstream 2698990 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 3090623 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 3419160 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 6174162 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 5194845 20937497 ~ 20944977 (+)
G112567 NA other downstream 5305684 21048336 ~ 21049038 (+)
G112600 NA other downstream 5400213 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 5522601 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 5874980 21617632 ~ 21622508 (+)

Expression


Co-expression Network