Gene
RNA
| Item | Value |
|---|---|
| gene id | G111767 |
| gene name | LOC107575789 |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 15752821 ~ 15753235 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139946 | True | 313 | TUCP | 0.46 | 2 | 15752821 | 15753235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006717 | NA | coding | downstream | 13373 | 15735298 ~ 15739448 (-) |
| AMCG00006718 | NA | coding | downstream | 17531 | 15734665 ~ 15735290 (-) |
| AMCG00006712 | NA | coding | downstream | 48214 | 15702374 ~ 15704607 (-) |
| AMCG00006711 | NA | coding | downstream | 61774 | 15686692 ~ 15691047 (-) |
| AMCG00006707 | NA | coding | downstream | 121650 | 15627216 ~ 15631171 (-) |
| AMCG00006715 | NA | coding | upstream | 3047 | 15756282 ~ 15765276 (-) |
| AMCG00006714 | NA | coding | upstream | 92996 | 15846231 ~ 15848777 (-) |
| AMCG00006716 | nap1l1,LOC106609764 | coding | upstream | 96686 | 15849921 ~ 15869937 (-) |
| AMCG00006720 | osbpl8 | coding | upstream | 146308 | 15899543 ~ 15928141 (-) |
| AMCG00006722 | csrp2,LOC107383140,LOC107087065 | coding | upstream | 279184 | 16032419 ~ 16039388 (-) |
| G111765 | NA | non-coding | downstream | 10106 | 15742446 ~ 15742715 (-) |
| G111759 | NA | non-coding | downstream | 23288 | 15728613 ~ 15729533 (-) |
| G111736 | NA | non-coding | downstream | 93409 | 15657998 ~ 15659412 (-) |
| G111730 | NA | non-coding | downstream | 194620 | 15557943 ~ 15558201 (-) |
| G111728 | NA | non-coding | downstream | 214985 | 15537476 ~ 15537836 (-) |
| G111940 | NA | non-coding | upstream | 1109442 | 16862677 ~ 16862967 (-) |
| G111945 | rs16,rps16,LOC103382554 | non-coding | upstream | 1145184 | 16898419 ~ 16901537 (-) |
| G112020 | NA | non-coding | upstream | 1355742 | 17108977 ~ 17327586 (-) |
| G112024 | LOC103376870 | non-coding | upstream | 1375082 | 17128317 ~ 17135516 (-) |
| G112140 | NA | non-coding | upstream | 2646028 | 18399263 ~ 18408777 (-) |
| G111621 | NA | other | downstream | 998851 | 14712017 ~ 14753970 (-) |
| G111489 | NA | other | downstream | 1388399 | 14360228 ~ 14364422 (-) |
| AMCG00006663 | hmga2 | other | downstream | 2249593 | 13455432 ~ 13503228 (-) |
| AMCG00006641 | mrps33,LOC106591474 | other | downstream | 2874165 | 12876292 ~ 12878656 (-) |
| AMCG00006625 | c4h11orf98,c8h11orf98,cunh11orf98,c19h11orf98 | other | downstream | 3612416 | 12137182 ~ 12140405 (-) |
| AMCG00006719 | NA | other | upstream | 127895 | 15881130 ~ 15896869 (-) |
| G112059 | NA | other | upstream | 1879656 | 17632891 ~ 17633445 (-) |
| AMCG00006754 | NA | other | upstream | 2586035 | 18339270 ~ 18366562 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 3869920 | 19623155 ~ 19631895 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | upstream | 3879858 | 19633093 ~ 19635925 (-) |
