G111786


Basic Information

Item Value
gene id G111786
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 15784519 ~ 15784762 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU139965
caccgatcagccataacattttgaccacctgcctaatattgtgtaggtcccccttttgccgccaaaacagccctgacccgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaaattgcgaggtggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139965 True 244 lncRNA 0.52 1 15784519 15784762

Neighbor

gene id symbol gene type direction distance location
AMCG00006710 NA coding upstream 58379 15720053 ~ 15726140 (+)
AMCG00006708 NA coding upstream 66181 15713827 ~ 15718338 (+)
AMCG00006709 krr1,LOC107395694 coding upstream 101450 15674427 ~ 15683069 (+)
AMCG00006705 NA coding upstream 716897 15066888 ~ 15067622 (+)
AMCG00006703 tph2,LOC108263971,LOC108423504,LOC106561539 coding upstream 747494 15006312 ~ 15037025 (+)
AMCG00006721 zdhhc17,LOC102798393,LOC107708015 coding downstream 214634 15999396 ~ 16030884 (+)
AMCG00006724 NA coding downstream 550348 16335110 ~ 16345016 (+)
AMCG00006725 NA coding downstream 569688 16354450 ~ 16356424 (+)
AMCG00006726 NA coding downstream 593018 16377780 ~ 16425206 (+)
AMCG00006727 syt1 coding downstream 873533 16658295 ~ 16677242 (+)
G111764 NA non-coding upstream 41867 15742438 ~ 15742652 (+)
G111727 NA non-coding upstream 246678 15537429 ~ 15537841 (+)
G111726 NA non-coding upstream 307805 15476154 ~ 15476714 (+)
G111699 NA non-coding upstream 584516 15195294 ~ 15200003 (+)
G111666 NA non-coding upstream 841595 14940208 ~ 14942924 (+)
G111788 LOC106576514 non-coding downstream 65159 15849921 ~ 15869801 (+)
G111898 NA non-coding downstream 930056 16714818 ~ 16722048 (+)
G111909 NA non-coding downstream 994640 16779402 ~ 16810470 (+)
G111941 NA non-coding downstream 1078394 16863156 ~ 16863355 (+)
G112106 NA non-coding downstream 2430031 18214793 ~ 18215048 (+)
AMCG00006672 NA other upstream 1845044 13933666 ~ 13939475 (+)
G111197 NA other upstream 2741071 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 3132704 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 3461241 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 6216243 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 5152735 20937497 ~ 20944977 (+)
G112567 NA other downstream 5263574 21048336 ~ 21049038 (+)
G112600 NA other downstream 5358103 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 5480491 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 5832870 21617632 ~ 21622508 (+)

Expression


Co-expression Network