Gene
RNA
| Item | Value |
|---|---|
| gene id | G112020 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 17108977 ~ 17327586 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140283 | True | 452 | lncRNA | 0.43 | 2 | 17108977 | 17327586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006737 | lin7a | coding | downstream | 36580 | 17060363 ~ 17072397 (-) |
| AMCG00006736 | ppp1r12a | coding | downstream | 247200 | 16861107 ~ 16861777 (-) |
| AMCG00006735 | ppp1r12a,LOC107591124 | coding | downstream | 273937 | 16800846 ~ 16835040 (-) |
| AMCG00006734 | NA | coding | downstream | 325420 | 16716275 ~ 16783557 (-) |
| AMCG00006723 | NA | coding | downstream | 1047167 | 16051366 ~ 16061810 (-) |
| AMCG00006743 | NA | coding | upstream | 76040 | 17403626 ~ 17406828 (-) |
| AMCG00006746 | slc6a15,LOC102794091 | coding | upstream | 444381 | 17771967 ~ 17793459 (-) |
| AMCG00006745 | NA | coding | upstream | 617430 | 17945016 ~ 17954821 (-) |
| AMCG00006747 | mgat4c,LOC107553950,LOC106573111 | coding | upstream | 660443 | 17988029 ~ 17991899 (-) |
| AMCG00006757 | NA | coding | upstream | 890587 | 18218173 ~ 18218449 (-) |
| G111945 | rs16,rps16,LOC103382554 | non-coding | downstream | 207440 | 16898419 ~ 16901537 (-) |
| G111940 | NA | non-coding | downstream | 246010 | 16862677 ~ 16862967 (-) |
| G111765 | NA | non-coding | downstream | 1366262 | 15742446 ~ 15742715 (-) |
| G111759 | NA | non-coding | downstream | 1379444 | 15728613 ~ 15729533 (-) |
| G111736 | NA | non-coding | downstream | 1449565 | 15657998 ~ 15659412 (-) |
| G112140 | NA | non-coding | upstream | 1071677 | 18399263 ~ 18408777 (-) |
| G112195 | NA | non-coding | upstream | 1367486 | 18695072 ~ 18745217 (-) |
| G112205 | NA | non-coding | upstream | 1556042 | 18883628 ~ 18886046 (-) |
| G112270 | LOC100136012 | non-coding | upstream | 2081233 | 19408819 ~ 19418420 (-) |
| G112287 | NA | non-coding | upstream | 2187213 | 19514799 ~ 19515004 (-) |
| AMCG00006719 | NA | other | downstream | 1212108 | 15881130 ~ 15896869 (-) |
| G111767 | LOC107575789 | other | downstream | 1355742 | 15752821 ~ 15753235 (-) |
| G111621 | NA | other | downstream | 2355007 | 14712017 ~ 14753970 (-) |
| G111489 | NA | other | downstream | 2744555 | 14360228 ~ 14364422 (-) |
| AMCG00006663 | hmga2 | other | downstream | 3605749 | 13455432 ~ 13503228 (-) |
| G112059 | NA | other | upstream | 305305 | 17632891 ~ 17633445 (-) |
| AMCG00006754 | NA | other | upstream | 1011684 | 18339270 ~ 18366562 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 2295569 | 19623155 ~ 19631895 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | upstream | 2305507 | 19633093 ~ 19635925 (-) |
| G112420 | NA | other | upstream | 2908270 | 20235856 ~ 20236206 (-) |
