G112024 (LOC103376870)


Basic Information

Item Value
gene id G112024
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 17128317 ~ 17135516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140287
TACCCggtggggtcttctgctgttgtagcccatcCGCCTCAATGTTGTACGTGTCAACAacagcttgaatcagtcggcccattctcctctgacctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaacttagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatattactgtactgtacagatTCAATGTCATCTTATGTTATGCTTCCACAAGTATCAGGGTGACATTTCTATGATTCTAGAAGGCAGTTGGGggataaagtatatataaatgcatcagaAATGTACATTGATTTTCAATTTCTG

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140287 True 591 lncRNA 0.42 2 17128317 17135516

Neighbor

gene id symbol gene type direction distance location
AMCG00006737 lin7a coding downstream 55920 17060363 ~ 17072397 (-)
AMCG00006736 ppp1r12a coding downstream 266540 16861107 ~ 16861777 (-)
AMCG00006735 ppp1r12a,LOC107591124 coding downstream 293277 16800846 ~ 16835040 (-)
AMCG00006734 NA coding downstream 344760 16716275 ~ 16783557 (-)
AMCG00006723 NA coding downstream 1066507 16051366 ~ 16061810 (-)
AMCG00006740 NA coding upstream 9183 17144699 ~ 17271736 (-)
AMCG00006741 ppfia2 coding upstream 191113 17326629 ~ 17327076 (-)
AMCG00006743 NA coding upstream 268110 17403626 ~ 17406828 (-)
AMCG00006746 slc6a15,LOC102794091 coding upstream 636451 17771967 ~ 17793459 (-)
AMCG00006745 NA coding upstream 809500 17945016 ~ 17954821 (-)
G111945 rs16,rps16,LOC103382554 non-coding downstream 226780 16898419 ~ 16901537 (-)
G111940 NA non-coding downstream 265350 16862677 ~ 16862967 (-)
G111765 NA non-coding downstream 1385602 15742446 ~ 15742715 (-)
G111759 NA non-coding downstream 1398784 15728613 ~ 15729533 (-)
G111736 NA non-coding downstream 1468905 15657998 ~ 15659412 (-)
G112140 NA non-coding upstream 1263747 18399263 ~ 18408777 (-)
G112195 NA non-coding upstream 1559556 18695072 ~ 18745217 (-)
G112205 NA non-coding upstream 1748112 18883628 ~ 18886046 (-)
G112270 LOC100136012 non-coding upstream 2273303 19408819 ~ 19418420 (-)
G112287 NA non-coding upstream 2379283 19514799 ~ 19515004 (-)
AMCG00006719 NA other downstream 1231448 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 1375082 15752821 ~ 15753235 (-)
G111621 NA other downstream 2374347 14712017 ~ 14753970 (-)
G111489 NA other downstream 2763895 14360228 ~ 14364422 (-)
AMCG00006663 hmga2 other downstream 3625089 13455432 ~ 13503228 (-)
G112059 NA other upstream 497375 17632891 ~ 17633445 (-)
AMCG00006754 NA other upstream 1203754 18339270 ~ 18366562 (-)
AMCG00006773 tmem243b,tmem243 other upstream 2487639 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 2497577 19633093 ~ 19635925 (-)
G112420 NA other upstream 3100340 20235856 ~ 20236206 (-)

Expression


Co-expression Network