G112106


Basic Information

Item Value
gene id G112106
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18214793 ~ 18215048 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140403
caccgatcagccataacattatgaccactgacaggtgaagtgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagcataaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140403 True 256 lncRNA 0.46 1 18214793 18215048

Neighbor

gene id symbol gene type direction distance location
AMCG00006750 NA coding upstream 250022 17963401 ~ 17964771 (+)
AMCG00006751 NA coding upstream 272569 17938902 ~ 17942224 (+)
AMCG00006748 NA coding upstream 350135 17860132 ~ 17864658 (+)
AMCG00006749 NA coding upstream 359403 17817815 ~ 17855390 (+)
AMCG00006744 LOC106561381,LOC108414015,LOC106573180 coding upstream 650155 17537677 ~ 17564638 (+)
AMCG00006753 NA coding downstream 102645 18317693 ~ 18339457 (+)
AMCG00006752 LOC107577127 coding downstream 153616 18368664 ~ 18400191 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding downstream 1322285 19537333 ~ 19541966 (+)
AMCG00006772 grm3,LOC107090533 coding downstream 1340355 19555403 ~ 19568758 (+)
AMCG00006770 LOC106594134 coding downstream 1396271 19611319 ~ 19621286 (+)
G111941 NA non-coding upstream 1351438 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 1404323 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 1492745 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 2344992 15849921 ~ 15869801 (+)
G111786 NA non-coding upstream 2430031 15784519 ~ 15784762 (+)
G112181 NA non-coding downstream 478830 18693878 ~ 18694311 (+)
G112182 NA non-coding downstream 480111 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 685891 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 880580 19095628 ~ 19100398 (+)
G112259 NA non-coding downstream 1180869 19395917 ~ 19396197 (+)
AMCG00006672 NA other upstream 4275318 13933666 ~ 13939475 (+)
G111197 NA other upstream 5171345 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 5562978 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 5891515 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 8646517 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 2722449 20937497 ~ 20944977 (+)
G112567 NA other downstream 2833288 21048336 ~ 21049038 (+)
G112600 NA other downstream 2927817 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 3050205 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 3402584 21617632 ~ 21622508 (+)

Expression


Co-expression Network