G112181


Basic Information

Item Value
gene id G112181
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 18693878 ~ 18694311 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140493
cttggctgtgtgttttgggtcattgtcatgctggaatacccattgAACGGAGTGCCAATTTGTAACCTTTTGGATGGtctaaaatacacatacaggCAGGGAACGGAGGCAAAAGGCTAAAGTATAAGCTTCTTAAGAAATCAAAAAAAGTAAGCAGATCCAATACTCCCATTTCGAGAACAAAGCGATCGGAGCACACGGATACACTGGAGGCTAAATCAGACCGAGTGGGAAAATGAAAAGCCAGTTAAGACAGGATCAGGGGCAAGTGATAAATGTAATTGGTCAACTGGTGATTGAACAATAAAGGCAGTGGAATTAAATTGGCAGATCAATGAACACATTAAGGTAAAGCTAGCTATTTCAGGCAGGAGGGTGAATCCTAACATGAGATCTGGTGCaacagtcccagagattccatgGTGAGGGTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140493 True 434 lncRNA 0.43 1 18693878 18694311

Neighbor

gene id symbol gene type direction distance location
AMCG00006752 LOC107577127 coding upstream 293687 18368664 ~ 18400191 (+)
AMCG00006753 NA coding upstream 354421 18317693 ~ 18339457 (+)
AMCG00006750 NA coding upstream 729107 17963401 ~ 17964771 (+)
AMCG00006751 NA coding upstream 751654 17938902 ~ 17942224 (+)
AMCG00006748 NA coding upstream 829220 17860132 ~ 17864658 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding downstream 843022 19537333 ~ 19541966 (+)
AMCG00006772 grm3,LOC107090533 coding downstream 861092 19555403 ~ 19568758 (+)
AMCG00006770 LOC106594134 coding downstream 917008 19611319 ~ 19621286 (+)
AMCG00006771 NA coding downstream 941806 19636117 ~ 19642171 (+)
AMCG00006779 NA coding downstream 952819 19647130 ~ 19650694 (+)
G112106 NA non-coding upstream 478830 18214793 ~ 18215048 (+)
G111941 NA non-coding upstream 1830523 16863156 ~ 16863355 (+)
G111909 NA non-coding upstream 1883408 16779402 ~ 16810470 (+)
G111898 NA non-coding upstream 1971830 16714818 ~ 16722048 (+)
G111788 LOC106576514 non-coding upstream 2824077 15849921 ~ 15869801 (+)
G112182 NA non-coding downstream 848 18695159 ~ 18745217 (+)
G112207 NA non-coding downstream 206628 18900939 ~ 18903543 (+)
G112233 NA non-coding downstream 401317 19095628 ~ 19100398 (+)
G112259 NA non-coding downstream 701606 19395917 ~ 19396197 (+)
G112275 NA non-coding downstream 801223 19495534 ~ 19495765 (+)
AMCG00006672 NA other upstream 4754403 13933666 ~ 13939475 (+)
G111197 NA other upstream 5650430 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 6042063 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 6370600 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 9125602 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 2243186 20937497 ~ 20944977 (+)
G112567 NA other downstream 2354025 21048336 ~ 21049038 (+)
G112600 NA other downstream 2448554 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 2570942 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 2923321 21617632 ~ 21622508 (+)

Expression


Co-expression Network