Gene
RNA
| Item | Value |
|---|---|
| gene id | G112270 |
| gene name | LOC100136012 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 19408819 ~ 19418420 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140596 | True | 503 | lncRNA | 0.48 | 2 | 19408819 | 19418420 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006775 | NA | coding | downstream | 843 | 19403281 ~ 19407976 (-) |
| AMCG00006768 | NA | coding | downstream | 72523 | 19307131 ~ 19336296 (-) |
| AMCG00006767 | NA | coding | downstream | 274092 | 19095536 ~ 19134727 (-) |
| AMCG00006765 | NA | coding | downstream | 362758 | 19006380 ~ 19046061 (-) |
| AMCG00006764 | NA | coding | downstream | 406038 | 19000927 ~ 19002781 (-) |
| AMCG00006776 | NA | coding | upstream | 151314 | 19569734 ~ 19593231 (-) |
| AMCG00006777 | LOC107743993 | coding | upstream | 225198 | 19643618 ~ 19646890 (-) |
| AMCG00006780 | NA | coding | upstream | 261181 | 19679601 ~ 19781353 (-) |
| AMCG00006785 | prpf18 | coding | upstream | 522637 | 19941057 ~ 19947697 (-) |
| AMCG00006790 | cpt1b,LOC100329197,LOC106573415 | coding | upstream | 553207 | 19971627 ~ 19981435 (-) |
| G112205 | NA | non-coding | downstream | 522773 | 18883628 ~ 18886046 (-) |
| G112195 | NA | non-coding | downstream | 663602 | 18695072 ~ 18745217 (-) |
| G112140 | NA | non-coding | downstream | 1000042 | 18399263 ~ 18408777 (-) |
| G112020 | NA | non-coding | downstream | 2081233 | 17108977 ~ 17327586 (-) |
| G112024 | LOC103376870 | non-coding | downstream | 2273303 | 17128317 ~ 17135516 (-) |
| G112287 | NA | non-coding | upstream | 96379 | 19514799 ~ 19515004 (-) |
| G112288 | LOC108263977,LOC105018424 | non-coding | upstream | 118785 | 19537205 ~ 19537793 (-) |
| G112289 | grm3,LOC108263977,LOC108444204 | non-coding | upstream | 122683 | 19541103 ~ 19541968 (-) |
| G112290 | grm3,LOC107090533,LOC106924857 | non-coding | upstream | 146536 | 19564956 ~ 19566015 (-) |
| G112292 | NA | non-coding | upstream | 150097 | 19568517 ~ 19569672 (-) |
| AMCG00006754 | NA | other | downstream | 1042257 | 18339270 ~ 18366562 (-) |
| G112059 | NA | other | downstream | 1775374 | 17632891 ~ 17633445 (-) |
| AMCG00006719 | NA | other | downstream | 3511950 | 15881130 ~ 15896869 (-) |
| G111767 | LOC107575789 | other | downstream | 3655584 | 15752821 ~ 15753235 (-) |
| G111621 | NA | other | downstream | 4654849 | 14712017 ~ 14753970 (-) |
| AMCG00006773 | tmem243b,tmem243 | other | upstream | 204735 | 19623155 ~ 19631895 (-) |
| AMCG00006774 | meig1,LOC107581293,LOC107744135,LOC107592215 | other | upstream | 214673 | 19633093 ~ 19635925 (-) |
| G112420 | NA | other | upstream | 817436 | 20235856 ~ 20236206 (-) |
| AMCG00006807 | NA | other | upstream | 1228900 | 20647320 ~ 20653659 (-) |
| AMCG00006813 | NA | other | upstream | 1435637 | 20854057 ~ 20964562 (-) |
