G112288 (LOC108263977,LOC105018424)


Basic Information

Item Value
gene id G112288
gene name LOC108263977,LOC105018424
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19537205 ~ 19537793 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140615
TGTATAGAGACGCTACTGTAGGATCCTCCAATCACACCAGCTATCACTAAGGGGCTATTATCTTGGATAGCATAGGAGCCATCAGGGCATATAAATTCTGTTTCATCTACTTTGGTCAGGGATGCTCTGACAAATTCCAAGGACTGCTCCAAAGCATACGTATCTCTTGAACATGTATCCAGGATGTGCACACCAAGAGAGACCCCAGGTAGCAAAGACTGATCTCTGTTGATCGAATCGATTGCAAACAACATAGCCTCCAAGCGCTGTATCCCCCTTTCTTCGTTTATTCTCCCACATTCATCCATTCCCACGCCCTTTTCGTGGATGGGAAAAAGACCTCCTAACACGAGATCTCCATCGATCTTGATCTCTTTCCTAATGAAGCTGGTATCACTGAATGCGAGTTGGATTCCTCTTGAGAATAAAATCAAGAAAAGTGCTTGGAACTGGGCCACCATGTTTAGAGGACTGGGCTACACACAATGAGAGGCATCAGAGGGAACACTGCTTGTTTTTGCGTCCCACGGAAAGTTAAAGAATATCCAGTTGGACCAAACATGGAGAAGAAGACTCCATGAATTTCAGC

Function

NR:

description
PREDICTED: metabotropic glutamate receptor 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140615 True 589 lncRNA 0.45 1 19537205 19537793

Neighbor

gene id symbol gene type direction distance location
AMCG00006775 NA coding downstream 129229 19403281 ~ 19407976 (-)
AMCG00006768 NA coding downstream 200909 19307131 ~ 19336296 (-)
AMCG00006767 NA coding downstream 402478 19095536 ~ 19134727 (-)
AMCG00006765 NA coding downstream 491144 19006380 ~ 19046061 (-)
AMCG00006764 NA coding downstream 534424 19000927 ~ 19002781 (-)
AMCG00006776 NA coding upstream 31941 19569734 ~ 19593231 (-)
AMCG00006777 LOC107743993 coding upstream 105825 19643618 ~ 19646890 (-)
AMCG00006780 NA coding upstream 141808 19679601 ~ 19781353 (-)
AMCG00006785 prpf18 coding upstream 403264 19941057 ~ 19947697 (-)
AMCG00006790 cpt1b,LOC100329197,LOC106573415 coding upstream 433834 19971627 ~ 19981435 (-)
G112287 NA non-coding downstream 22201 19514799 ~ 19515004 (-)
G112270 LOC100136012 non-coding downstream 118785 19408819 ~ 19418420 (-)
G112205 NA non-coding downstream 651159 18883628 ~ 18886046 (-)
G112195 NA non-coding downstream 791988 18695072 ~ 18745217 (-)
G112140 NA non-coding downstream 1128428 18399263 ~ 18408777 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding upstream 3310 19541103 ~ 19541968 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding upstream 27163 19564956 ~ 19566015 (-)
G112292 NA non-coding upstream 30724 19568517 ~ 19569672 (-)
G112410 NA non-coding upstream 541098 20078891 ~ 20079411 (-)
G112496 NA non-coding upstream 1176290 20714083 ~ 20756786 (-)
AMCG00006754 NA other downstream 1170643 18339270 ~ 18366562 (-)
G112059 NA other downstream 1903760 17632891 ~ 17633445 (-)
AMCG00006719 NA other downstream 3640336 15881130 ~ 15896869 (-)
G111767 LOC107575789 other downstream 3783970 15752821 ~ 15753235 (-)
G111621 NA other downstream 4783235 14712017 ~ 14753970 (-)
AMCG00006773 tmem243b,tmem243 other upstream 85362 19623155 ~ 19631895 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other upstream 95300 19633093 ~ 19635925 (-)
G112420 NA other upstream 698063 20235856 ~ 20236206 (-)
AMCG00006807 NA other upstream 1109527 20647320 ~ 20653659 (-)
AMCG00006813 NA other upstream 1316264 20854057 ~ 20964562 (-)

Expression


Co-expression Network